Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.86■□□□□ 0.45
COL15A1P39059 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC17.86■□□□□ 0.45
COL15A1P39059 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.86■□□□□ 0.45
COL15A1P39059 AC018695.6-201ENST00000614011 534 ntBASIC17.86■□□□□ 0.45
COL15A1P39059 AP000769.1-203ENST00000637245 208 ntBASIC17.86■□□□□ 0.45
COL15A1P39059 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.86■□□□□ 0.45
COL15A1P39059 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
COL15A1P39059 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.86■□□□□ 0.45
COL15A1P39059 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.86■□□□□ 0.45
COL15A1P39059 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL15A1P39059 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
COL15A1P39059 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
COL15A1P39059 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.86■□□□□ 0.45
COL15A1P39059 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 AC007686.3-201ENST00000619017 3487 ntBASIC17.85■□□□□ 0.45
COL15A1P39059 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.85■□□□□ 0.45
COL15A1P39059 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COL15A1P39059 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 ZNF436-AS1-201ENST00000335648 2547 ntBASIC17.85■□□□□ 0.45
COL15A1P39059 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.85■□□□□ 0.45
COL15A1P39059 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
COL15A1P39059 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
COL15A1P39059 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
COL15A1P39059 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
COL15A1P39059 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
COL15A1P39059 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
COL15A1P39059 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
COL15A1P39059 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
COL15A1P39059 AP000354.1-201ENST00000396982 456 ntBASIC17.85■□□□□ 0.45
COL15A1P39059 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.85■□□□□ 0.45
COL15A1P39059 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC17.85■□□□□ 0.45
COL15A1P39059 PSAT1P2-201ENST00000426107 972 ntBASIC17.85■□□□□ 0.45
COL15A1P39059 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC17.85■□□□□ 0.45
COL15A1P39059 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.85■□□□□ 0.45
COL15A1P39059 F11R-204ENST00000537746 1245 ntTSL 2 BASIC17.85■□□□□ 0.45
COL15A1P39059 AC092862.1-201ENST00000541534 533 ntBASIC17.85■□□□□ 0.45
COL15A1P39059 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.85■□□□□ 0.45
COL15A1P39059 AC027139.1-201ENST00000565286 951 ntBASIC17.85■□□□□ 0.45
COL15A1P39059 CES1P2-201ENST00000566467 1242 ntBASIC17.85■□□□□ 0.45
COL15A1P39059 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.85■□□□□ 0.45
COL15A1P39059 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.85■□□□□ 0.45
COL15A1P39059 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.85■□□□□ 0.45
COL15A1P39059 AC099063.4-201ENST00000641099 1602 ntBASIC17.85■□□□□ 0.45
COL15A1P39059 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.85■□□□□ 0.45
COL15A1P39059 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL15A1P39059 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
COL15A1P39059 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COL15A1P39059 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
COL15A1P39059 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.84■□□□□ 0.45
COL15A1P39059 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
COL15A1P39059 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.84■□□□□ 0.45
COL15A1P39059 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.84■□□□□ 0.45
COL15A1P39059 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 GOLGA2P8-201ENST00000505201 779 ntBASIC17.84■□□□□ 0.45
COL15A1P39059 AC100858.1-201ENST00000514059 1228 ntBASIC17.84■□□□□ 0.45
COL15A1P39059 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC17.84■□□□□ 0.45
COL15A1P39059 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.84■□□□□ 0.45
COL15A1P39059 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.84■□□□□ 0.45
COL15A1P39059 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.84■□□□□ 0.45
COL15A1P39059 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
COL15A1P39059 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 HSPA8P5-201ENST00000456928 2069 ntBASIC17.84■□□□□ 0.45
COL15A1P39059 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
COL15A1P39059 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL15A1P39059 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.84■□□□□ 0.45
COL15A1P39059 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms