Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC17.44■□□□□ 0.38
PDE6BP35913 AC139713.2-207ENST00000641556 1292 ntBASIC17.44■□□□□ 0.38
PDE6BP35913 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDE6BP35913 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 LINC02228-204ENST00000642115 2962 ntBASIC17.44■□□□□ 0.38
PDE6BP35913 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC17.44■□□□□ 0.38
PDE6BP35913 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDE6BP35913 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PDE6BP35913 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6BP35913 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
PDE6BP35913 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6BP35913 DBET-201ENST00000630918 3363 ntBASIC17.43■□□□□ 0.38
PDE6BP35913 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.43■□□□□ 0.38
PDE6BP35913 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.43■□□□□ 0.38
PDE6BP35913 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.43■□□□□ 0.38
PDE6BP35913 AC232323.1-201ENST00000540724 2099 ntBASIC17.43■□□□□ 0.38
PDE6BP35913 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PDE6BP35913 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PDE6BP35913 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.43■□□□□ 0.38
PDE6BP35913 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC17.43■□□□□ 0.38
PDE6BP35913 COQ10BP2-201ENST00000513804 724 ntBASIC17.43■□□□□ 0.38
PDE6BP35913 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.43■□□□□ 0.38
PDE6BP35913 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC17.43■□□□□ 0.38
PDE6BP35913 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PDE6BP35913 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC17.43■□□□□ 0.38
PDE6BP35913 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC17.43■□□□□ 0.38
PDE6BP35913 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC17.43■□□□□ 0.38
PDE6BP35913 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PDE6BP35913 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.43■□□□□ 0.38
PDE6BP35913 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PDE6BP35913 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6BP35913 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6BP35913 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PDE6BP35913 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6BP35913 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6BP35913 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6BP35913 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PDE6BP35913 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PDE6BP35913 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PDE6BP35913 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6BP35913 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PDE6BP35913 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PDE6BP35913 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6BP35913 AC106827.1-201ENST00000366454 431 ntBASIC17.42■□□□□ 0.38
PDE6BP35913 OR10N1P-201ENST00000392758 869 ntBASIC17.42■□□□□ 0.38
PDE6BP35913 PGAM1P11-201ENST00000416729 680 ntBASIC17.42■□□□□ 0.38
PDE6BP35913 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC17.42■□□□□ 0.38
PDE6BP35913 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC17.42■□□□□ 0.38
PDE6BP35913 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC17.42■□□□□ 0.38
PDE6BP35913 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.42■□□□□ 0.38
PDE6BP35913 KRT18P15-201ENST00000458108 1291 ntBASIC17.42■□□□□ 0.38
PDE6BP35913 RN7SL351P-201ENST00000469306 248 ntBASIC17.42■□□□□ 0.38
PDE6BP35913 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC17.42■□□□□ 0.38
PDE6BP35913 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6BP35913 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC17.42■□□□□ 0.38
PDE6BP35913 AC078814.4-201ENST00000546650 327 ntBASIC17.42■□□□□ 0.38
PDE6BP35913 AL049840.2-201ENST00000602722 535 ntBASIC17.42■□□□□ 0.38
PDE6BP35913 AL031673.1-201ENST00000611460 466 ntBASIC17.42■□□□□ 0.38
PDE6BP35913 PTPN20CP-201ENST00000614090 920 ntBASIC17.42■□□□□ 0.38
PDE6BP35913 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC17.42■□□□□ 0.38
PDE6BP35913 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.42■□□□□ 0.38
PDE6BP35913 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PDE6BP35913 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6BP35913 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PDE6BP35913 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6BP35913 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6BP35913 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6BP35913 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6BP35913 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.42■□□□□ 0.38
PDE6BP35913 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6BP35913 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6BP35913 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.41■□□□□ 0.38
PDE6BP35913 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6BP35913 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PDE6BP35913 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6BP35913 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms