Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KRT2P35908 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.41■□□□□ 0.22
KRT2P35908 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 TSPY25P-201ENST00000429463 745 ntBASIC16.41■□□□□ 0.22
KRT2P35908 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.41■□□□□ 0.22
KRT2P35908 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT2P35908 AC125604.1-201ENST00000496255 707 ntBASIC16.41■□□□□ 0.22
KRT2P35908 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT2P35908 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT2P35908 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT2P35908 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT2P35908 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT2P35908 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KRT2P35908 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
KRT2P35908 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KRT2P35908 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 AL590824.1-201ENST00000403828 1349 ntBASIC16.41■□□□□ 0.22
KRT2P35908 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
KRT2P35908 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KRT2P35908 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.41■□□□□ 0.22
KRT2P35908 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
KRT2P35908 AL928654.5-201ENST00000624831 2501 ntBASIC16.41■□□□□ 0.22
KRT2P35908 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
KRT2P35908 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.41■□□□□ 0.22
KRT2P35908 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT2P35908 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KRT2P35908 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT2P35908 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT2P35908 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KRT2P35908 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT2P35908 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT2P35908 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT2P35908 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT2P35908 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT2P35908 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT2P35908 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT2P35908 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT2P35908 MIR4538-201ENST00000581377 78 ntBASIC16.4■□□□□ 0.22
KRT2P35908 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT2P35908 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT2P35908 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KRT2P35908 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
KRT2P35908 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT2P35908 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 SHMT1P1-201ENST00000419974 1312 ntBASIC16.4■□□□□ 0.22
KRT2P35908 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT2P35908 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
KRT2P35908 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT2P35908 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT2P35908 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
KRT2P35908 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT2P35908 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT2P35908 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KRT2P35908 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT2P35908 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT2P35908 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT2P35908 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT2P35908 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms