Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.49□□□□□ -0.25
CHMP24386 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.49□□□□□ -0.25
CHMP24386 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CHMP24386 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.49□□□□□ -0.25
CHMP24386 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.49□□□□□ -0.25
CHMP24386 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.49□□□□□ -0.25
CHMP24386 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.49□□□□□ -0.25
CHMP24386 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
CHMP24386 BTBD6P1-201ENST00000412176 1267 ntBASIC13.49□□□□□ -0.25
CHMP24386 CHMP1AP1-201ENST00000445563 662 ntBASIC13.49□□□□□ -0.25
CHMP24386 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.49□□□□□ -0.25
CHMP24386 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CHMP24386 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.49□□□□□ -0.25
CHMP24386 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CHMP24386 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.49□□□□□ -0.25
CHMP24386 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.49□□□□□ -0.25
CHMP24386 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.49□□□□□ -0.25
CHMP24386 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
CHMP24386 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CHMP24386 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.49□□□□□ -0.25
CHMP24386 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CHMP24386 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CHMP24386 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CHMP24386 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CHMP24386 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.49□□□□□ -0.25
CHMP24386 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CHMP24386 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CHMP24386 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CHMP24386 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 KRT8P4-201ENST00000509735 1454 ntBASIC13.48□□□□□ -0.25
CHMP24386 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 AL157996.1-201ENST00000624684 2299 ntBASIC13.48□□□□□ -0.25
CHMP24386 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CHMP24386 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CHMP24386 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 RN7SKP230-201ENST00000365642 335 ntBASIC13.48□□□□□ -0.25
CHMP24386 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 MTX1P1-201ENST00000440904 838 ntBASIC13.48□□□□□ -0.25
CHMP24386 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.48□□□□□ -0.25
CHMP24386 ALG3P1-201ENST00000508806 1114 ntBASIC13.48□□□□□ -0.25
CHMP24386 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CHMP24386 FAM86HP-204ENST00000513466 959 ntBASIC13.48□□□□□ -0.25
CHMP24386 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.48□□□□□ -0.25
CHMP24386 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CHMP24386 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CHMP24386 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.48□□□□□ -0.25
CHMP24386 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.48□□□□□ -0.25
CHMP24386 MIR6869-201ENST00000619434 62 ntBASIC13.48□□□□□ -0.25
CHMP24386 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CHMP24386 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms