Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CHCHD2P3-201ENST00000603038 451 ntBASIC12.21□□□□□ -0.45
HIST1H1DP16402 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.21□□□□□ -0.45
HIST1H1DP16402 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H1DP16402 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.21□□□□□ -0.46
HIST1H1DP16402 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.21□□□□□ -0.46
HIST1H1DP16402 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1DP16402 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.21□□□□□ -0.46
HIST1H1DP16402 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1DP16402 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1DP16402 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1DP16402 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.21□□□□□ -0.46
HIST1H1DP16402 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1DP16402 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1DP16402 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1DP16402 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
HIST1H1DP16402 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.21□□□□□ -0.46
HIST1H1DP16402 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1DP16402 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
HIST1H1DP16402 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
HIST1H1DP16402 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1DP16402 AC007541.1-201ENST00000570282 1469 ntBASIC12.21□□□□□ -0.46
HIST1H1DP16402 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HIST1H1DP16402 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 PCDHB18P-202ENST00000526308 3197 ntBASIC12.2□□□□□ -0.46
HIST1H1DP16402 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 AC134312.5-201ENST00000568031 1313 ntBASIC12.2□□□□□ -0.46
HIST1H1DP16402 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.2□□□□□ -0.46
HIST1H1DP16402 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 INE1-201ENST00000456273 945 ntBASIC12.2□□□□□ -0.46
HIST1H1DP16402 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 AC005498.2-205ENST00000593218 784 ntBASIC12.2□□□□□ -0.46
HIST1H1DP16402 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 WFDC1-204ENST00000613603 549 ntBASIC12.2□□□□□ -0.46
HIST1H1DP16402 AC106028.4-201ENST00000614509 607 ntBASIC12.2□□□□□ -0.46
HIST1H1DP16402 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 AC027601.3-201ENST00000622907 509 ntBASIC12.2□□□□□ -0.46
HIST1H1DP16402 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.2□□□□□ -0.46
HIST1H1DP16402 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 Z82170.1-201ENST00000625081 3192 ntBASIC12.2□□□□□ -0.46
HIST1H1DP16402 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.2□□□□□ -0.46
HIST1H1DP16402 AC024075.2-201ENST00000598112 1473 ntBASIC12.2□□□□□ -0.46
HIST1H1DP16402 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H1DP16402 AL731571.1-201ENST00000617058 5428 ntBASIC12.2□□□□□ -0.46
HIST1H1DP16402 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
HIST1H1DP16402 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1DP16402 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1DP16402 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
HIST1H1DP16402 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H1DP16402 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1DP16402 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1DP16402 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1DP16402 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H1DP16402 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
HIST1H1DP16402 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1DP16402 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H1DP16402 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1DP16402 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1DP16402 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.19□□□□□ -0.46
HIST1H1DP16402 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H1DP16402 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms