Protein–RNA interactions for Protein: P14867

GABRA1, Gamma-aminobutyric acid receptor subunit alpha-1, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1P14867 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GABRA1P14867 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
GABRA1P14867 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.11□□□□□ -0.31
GABRA1P14867 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GABRA1P14867 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.11□□□□□ -0.31
GABRA1P14867 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GABRA1P14867 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.11□□□□□ -0.31
GABRA1P14867 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.11□□□□□ -0.31
GABRA1P14867 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.11□□□□□ -0.31
GABRA1P14867 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.11□□□□□ -0.31
GABRA1P14867 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.11□□□□□ -0.31
GABRA1P14867 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.11□□□□□ -0.31
GABRA1P14867 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
GABRA1P14867 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.11□□□□□ -0.31
GABRA1P14867 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.11□□□□□ -0.31
GABRA1P14867 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.11□□□□□ -0.31
GABRA1P14867 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.11□□□□□ -0.31
GABRA1P14867 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.11□□□□□ -0.31
GABRA1P14867 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.11□□□□□ -0.31
GABRA1P14867 MIR3907-201ENST00000579424 151 ntBASIC13.11□□□□□ -0.31
GABRA1P14867 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GABRA1P14867 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.11□□□□□ -0.31
GABRA1P14867 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.11□□□□□ -0.31
GABRA1P14867 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.11□□□□□ -0.31
GABRA1P14867 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
GABRA1P14867 AC079336.7-201ENST00000623428 1078 ntBASIC13.11□□□□□ -0.31
GABRA1P14867 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
GABRA1P14867 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.11□□□□□ -0.31
GABRA1P14867 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.11□□□□□ -0.31
GABRA1P14867 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.11□□□□□ -0.31
GABRA1P14867 AC011474.4-201ENST00000623523 2076 ntBASIC13.11□□□□□ -0.31
GABRA1P14867 AHCYP4-201ENST00000419201 1315 ntBASIC13.11□□□□□ -0.31
GABRA1P14867 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.11□□□□□ -0.31
GABRA1P14867 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GABRA1P14867 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA1P14867 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.11□□□□□ -0.31
GABRA1P14867 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
GABRA1P14867 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
GABRA1P14867 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
GABRA1P14867 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.1□□□□□ -0.31
GABRA1P14867 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
GABRA1P14867 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
GABRA1P14867 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.1□□□□□ -0.31
GABRA1P14867 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
GABRA1P14867 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
GABRA1P14867 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.1□□□□□ -0.31
GABRA1P14867 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.1□□□□□ -0.31
GABRA1P14867 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.1□□□□□ -0.31
GABRA1P14867 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.1□□□□□ -0.31
GABRA1P14867 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.1□□□□□ -0.31
GABRA1P14867 FTLP1-201ENST00000449155 526 ntBASIC13.1□□□□□ -0.31
GABRA1P14867 AC234782.1-201ENST00000451950 919 ntBASIC13.1□□□□□ -0.31
GABRA1P14867 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.1□□□□□ -0.31
GABRA1P14867 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.1□□□□□ -0.31
GABRA1P14867 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.1□□□□□ -0.31
GABRA1P14867 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.1□□□□□ -0.31
GABRA1P14867 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.1□□□□□ -0.31
GABRA1P14867 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
GABRA1P14867 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
GABRA1P14867 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.1□□□□□ -0.31
GABRA1P14867 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.1□□□□□ -0.31
GABRA1P14867 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.1□□□□□ -0.31
GABRA1P14867 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GABRA1P14867 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.1□□□□□ -0.31
GABRA1P14867 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.1□□□□□ -0.31
GABRA1P14867 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms