Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 DUX4L31-201ENST00000446466 1136 ntBASIC23.52■■□□□ 1.36
CFTRP13569 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC23.52■■□□□ 1.36
CFTRP13569 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC23.52■■□□□ 1.36
CFTRP13569 AP001102.1-201ENST00000528959 409 ntBASIC23.52■■□□□ 1.36
CFTRP13569 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CFTRP13569 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC23.52■■□□□ 1.36
CFTRP13569 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC23.52■■□□□ 1.36
CFTRP13569 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC23.52■■□□□ 1.36
CFTRP13569 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFTRP13569 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFTRP13569 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.52■■□□□ 1.36
CFTRP13569 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFTRP13569 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CFTRP13569 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CFTRP13569 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CFTRP13569 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CFTRP13569 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFTRP13569 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
CFTRP13569 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC23.52■■□□□ 1.36
CFTRP13569 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CFTRP13569 AC097474.1-201ENST00000506481 1371 ntBASIC23.52■■□□□ 1.36
CFTRP13569 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFTRP13569 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC23.52■■□□□ 1.36
CFTRP13569 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CFTRP13569 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFTRP13569 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CFTRP13569 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC23.52■■□□□ 1.36
CFTRP13569 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC23.52■■□□□ 1.35
CFTRP13569 AC026271.1-201ENST00000447794 1348 ntBASIC23.51■■□□□ 1.35
CFTRP13569 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC23.51■■□□□ 1.35
CFTRP13569 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFTRP13569 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CFTRP13569 AL031577.1-201ENST00000339867 399 ntBASIC23.51■■□□□ 1.35
CFTRP13569 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CFTRP13569 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFTRP13569 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
CFTRP13569 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC23.51■■□□□ 1.35
CFTRP13569 AC105443.1-201ENST00000433754 712 ntBASIC23.51■■□□□ 1.35
CFTRP13569 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC23.51■■□□□ 1.35
CFTRP13569 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CFTRP13569 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
CFTRP13569 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFTRP13569 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC23.51■■□□□ 1.35
CFTRP13569 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC23.51■■□□□ 1.35
CFTRP13569 MDC1-209ENST00000613547 830 ntTSL 5 BASIC23.51■■□□□ 1.35
CFTRP13569 FGD5P1-202ENST00000614866 2498 ntBASIC23.51■■□□□ 1.35
CFTRP13569 AC134878.2-201ENST00000620700 1265 ntBASIC23.51■■□□□ 1.35
CFTRP13569 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC23.51■■□□□ 1.35
CFTRP13569 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC23.51■■□□□ 1.35
CFTRP13569 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFTRP13569 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFTRP13569 AC040160.2-201ENST00000623816 1675 ntBASIC23.51■■□□□ 1.35
CFTRP13569 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CFTRP13569 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC23.51■■□□□ 1.35
CFTRP13569 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
CFTRP13569 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
CFTRP13569 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC23.5■■□□□ 1.35
CFTRP13569 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC23.5■■□□□ 1.35
CFTRP13569 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CFTRP13569 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CFTRP13569 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC23.5■■□□□ 1.35
CFTRP13569 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC23.5■■□□□ 1.35
CFTRP13569 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC23.5■■□□□ 1.35
CFTRP13569 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CFTRP13569 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CFTRP13569 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC23.5■■□□□ 1.35
CFTRP13569 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CFTRP13569 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC23.5■■□□□ 1.35
CFTRP13569 AL031768.1-201ENST00000606542 701 ntBASIC23.5■■□□□ 1.35
CFTRP13569 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CFTRP13569 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC23.5■■□□□ 1.35
CFTRP13569 AC245140.2-201ENST00000624054 1939 ntBASIC23.5■■□□□ 1.35
CFTRP13569 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CFTRP13569 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CFTRP13569 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CFTRP13569 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CFTRP13569 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CFTRP13569 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CFTRP13569 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CFTRP13569 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC23.49■■□□□ 1.35
CFTRP13569 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC23.49■■□□□ 1.35
CFTRP13569 RNA5SP84-201ENST00000364740 107 ntBASIC23.49■■□□□ 1.35
CFTRP13569 AC026884.1-201ENST00000418296 457 ntBASIC23.49■■□□□ 1.35
CFTRP13569 CCNL2P1-201ENST00000512846 969 ntBASIC23.49■■□□□ 1.35
CFTRP13569 AC211476.2-201ENST00000608799 708 ntBASIC23.49■■□□□ 1.35
CFTRP13569 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC23.49■■□□□ 1.35
CFTRP13569 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC23.49■■□□□ 1.35
CFTRP13569 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC23.49■■□□□ 1.35
CFTRP13569 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CFTRP13569 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CFTRP13569 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CFTRP13569 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CFTRP13569 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CFTRP13569 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
CFTRP13569 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CFTRP13569 THAP4-203ENST00000402545 833 ntTSL 5 BASIC23.49■■□□□ 1.35
CFTRP13569 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC23.49■■□□□ 1.35
CFTRP13569 AL450346.2-201ENST00000495602 1024 ntBASIC23.49■■□□□ 1.35
CFTRP13569 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC23.49■■□□□ 1.35
CFTRP13569 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms