Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CHGBP05060 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHGBP05060 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.12■□□□□ 0.33
CHGBP05060 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC17.12■□□□□ 0.33
CHGBP05060 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.12■□□□□ 0.33
CHGBP05060 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.12■□□□□ 0.33
CHGBP05060 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.12■□□□□ 0.33
CHGBP05060 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC17.12■□□□□ 0.33
CHGBP05060 AL591122.2-201ENST00000624125 1853 ntBASIC17.12■□□□□ 0.33
CHGBP05060 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CHGBP05060 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHGBP05060 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 TCAM1P-207ENST00000485295 1537 ntBASIC17.11■□□□□ 0.33
CHGBP05060 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC17.11■□□□□ 0.33
CHGBP05060 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17.11■□□□□ 0.33
CHGBP05060 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.11■□□□□ 0.33
CHGBP05060 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHGBP05060 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.11■□□□□ 0.33
CHGBP05060 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 MIR645-201ENST00000385283 94 ntBASIC17.11■□□□□ 0.33
CHGBP05060 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHGBP05060 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.11■□□□□ 0.33
CHGBP05060 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.11■□□□□ 0.33
CHGBP05060 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CHGBP05060 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.11■□□□□ 0.33
CHGBP05060 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CHGBP05060 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.11■□□□□ 0.33
CHGBP05060 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.11■□□□□ 0.33
CHGBP05060 AC016629.1-201ENST00000596579 586 ntBASIC17.11■□□□□ 0.33
CHGBP05060 AC068587.10-201ENST00000641210 219 ntBASIC17.11■□□□□ 0.33
CHGBP05060 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHGBP05060 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.11■□□□□ 0.33
CHGBP05060 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.11■□□□□ 0.33
CHGBP05060 AC068587.6-202ENST00000641839 5619 ntBASIC17.11■□□□□ 0.33
CHGBP05060 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHGBP05060 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CHGBP05060 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHGBP05060 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHGBP05060 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.11■□□□□ 0.33
CHGBP05060 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.11■□□□□ 0.33
CHGBP05060 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC17.11■□□□□ 0.33
CHGBP05060 KRT8P24-201ENST00000560290 1559 ntBASIC17.11■□□□□ 0.33
CHGBP05060 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.1■□□□□ 0.33
CHGBP05060 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
CHGBP05060 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.1■□□□□ 0.33
CHGBP05060 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CHGBP05060 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CHGBP05060 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
CHGBP05060 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.1■□□□□ 0.33
CHGBP05060 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.1■□□□□ 0.33
CHGBP05060 AL353637.1-201ENST00000451571 732 ntBASIC17.1■□□□□ 0.33
CHGBP05060 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.1■□□□□ 0.33
CHGBP05060 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.1■□□□□ 0.33
CHGBP05060 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHGBP05060 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CHGBP05060 PRKXP1-201ENST00000561423 1122 ntBASIC17.1■□□□□ 0.33
CHGBP05060 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.1■□□□□ 0.33
CHGBP05060 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.1■□□□□ 0.33
CHGBP05060 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.1■□□□□ 0.33
CHGBP05060 AC009145.4-201ENST00000625119 1294 ntBASIC17.1■□□□□ 0.33
CHGBP05060 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CHGBP05060 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.1■□□□□ 0.33
CHGBP05060 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHGBP05060 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms