Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.62■□□□□ 0.09
VTNP04004 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.62■□□□□ 0.09
VTNP04004 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
VTNP04004 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
VTNP04004 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
VTNP04004 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VTNP04004 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
VTNP04004 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.61■□□□□ 0.09
VTNP04004 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
VTNP04004 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.61■□□□□ 0.09
VTNP04004 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.61■□□□□ 0.09
VTNP04004 AC098934.1-203ENST00000442868 1262 ntBASIC15.61■□□□□ 0.09
VTNP04004 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.61■□□□□ 0.09
VTNP04004 AC018638.5-201ENST00000450885 754 ntBASIC15.61■□□□□ 0.09
VTNP04004 SCARNA12-201ENST00000459155 270 ntBASIC15.61■□□□□ 0.09
VTNP04004 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.61■□□□□ 0.09
VTNP04004 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.61■□□□□ 0.09
VTNP04004 AP003398.1-201ENST00000531124 318 ntBASIC15.61■□□□□ 0.09
VTNP04004 AC007952.4-201ENST00000573866 637 ntBASIC15.61■□□□□ 0.09
VTNP04004 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.61■□□□□ 0.09
VTNP04004 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.61■□□□□ 0.09
VTNP04004 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 AL596257.1-201ENST00000641463 2694 ntBASIC15.61■□□□□ 0.09
VTNP04004 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VTNP04004 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VTNP04004 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
VTNP04004 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VTNP04004 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
VTNP04004 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.6■□□□□ 0.09
VTNP04004 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
VTNP04004 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.6■□□□□ 0.09
VTNP04004 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.6■□□□□ 0.09
VTNP04004 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.6■□□□□ 0.09
VTNP04004 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
VTNP04004 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.6■□□□□ 0.09
VTNP04004 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.6■□□□□ 0.09
VTNP04004 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 AC012362.1-201ENST00000434906 739 ntBASIC15.6■□□□□ 0.09
VTNP04004 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.6■□□□□ 0.09
VTNP04004 DPY19L2P5-201ENST00000456300 331 ntBASIC15.6■□□□□ 0.09
VTNP04004 CHCHD2P2-201ENST00000503744 321 ntBASIC15.6■□□□□ 0.09
VTNP04004 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.6■□□□□ 0.09
VTNP04004 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.6■□□□□ 0.09
VTNP04004 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VTNP04004 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.6■□□□□ 0.09
VTNP04004 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.6■□□□□ 0.09
VTNP04004 RN7SL455P-201ENST00000580629 282 ntBASIC15.6■□□□□ 0.09
VTNP04004 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
VTNP04004 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms