Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
APOC1P02654 MST1P2-201ENST00000457982 2291 ntBASIC12.8□□□□□ -0.36
APOC1P02654 AOC4P-203ENST00000566825 2289 ntBASIC12.8□□□□□ -0.36
APOC1P02654 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
APOC1P02654 AL354989.2-201ENST00000435838 1540 ntBASIC12.8□□□□□ -0.36
APOC1P02654 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
APOC1P02654 AC092933.1-201ENST00000393644 945 ntBASIC12.8□□□□□ -0.36
APOC1P02654 AL136309.1-201ENST00000403917 691 ntBASIC12.8□□□□□ -0.36
APOC1P02654 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.8□□□□□ -0.36
APOC1P02654 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 TTTY23B-201ENST00000442790 549 ntBASIC12.8□□□□□ -0.36
APOC1P02654 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.8□□□□□ -0.36
APOC1P02654 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.8□□□□□ -0.36
APOC1P02654 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
APOC1P02654 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.8□□□□□ -0.36
APOC1P02654 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
APOC1P02654 ECM1P1-201ENST00000604092 1279 ntBASIC12.8□□□□□ -0.36
APOC1P02654 RPSAP52-203ENST00000622976 1023 ntBASIC12.8□□□□□ -0.36
APOC1P02654 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.8□□□□□ -0.36
APOC1P02654 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
APOC1P02654 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
APOC1P02654 AC064801.2-201ENST00000625052 1303 ntBASIC12.8□□□□□ -0.36
APOC1P02654 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
APOC1P02654 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 AL591122.2-201ENST00000624125 1853 ntBASIC12.8□□□□□ -0.36
APOC1P02654 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
APOC1P02654 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.8□□□□□ -0.36
APOC1P02654 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
APOC1P02654 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
APOC1P02654 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 CU639417.3-201ENST00000624240 1404 ntBASIC12.79□□□□□ -0.36
APOC1P02654 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
APOC1P02654 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.79□□□□□ -0.36
APOC1P02654 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.79□□□□□ -0.36
APOC1P02654 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
APOC1P02654 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.79□□□□□ -0.36
APOC1P02654 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.79□□□□□ -0.36
APOC1P02654 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
APOC1P02654 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 AL512384.1-201ENST00000406683 331 ntBASIC12.79□□□□□ -0.36
APOC1P02654 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 AC112492.5-201ENST00000421897 457 ntBASIC12.79□□□□□ -0.36
APOC1P02654 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.79□□□□□ -0.36
APOC1P02654 BCRP2-202ENST00000447763 634 ntBASIC12.79□□□□□ -0.36
APOC1P02654 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 BCRP6-201ENST00000510112 632 ntBASIC12.79□□□□□ -0.36
APOC1P02654 BCRP7-201ENST00000511549 544 ntBASIC12.79□□□□□ -0.36
APOC1P02654 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.79□□□□□ -0.36
APOC1P02654 GNRHR2-203ENST00000581100 1187 ntBASIC12.79□□□□□ -0.36
APOC1P02654 RN7SL713P-201ENST00000582127 302 ntBASIC12.79□□□□□ -0.36
APOC1P02654 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.79□□□□□ -0.36
APOC1P02654 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 BTNL10-201ENST00000595971 695 ntBASIC12.79□□□□□ -0.36
APOC1P02654 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.79□□□□□ -0.36
APOC1P02654 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.79□□□□□ -0.36
APOC1P02654 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 ZACNP1-201ENST00000612259 710 ntBASIC12.79□□□□□ -0.36
APOC1P02654 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.79□□□□□ -0.36
APOC1P02654 AC027601.3-201ENST00000622907 509 ntBASIC12.79□□□□□ -0.36
APOC1P02654 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
APOC1P02654 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms