Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 IGHV3-72-202ENST00000621503 303 ntBASIC11.54□□□□□ -0.56
UPK2O00526 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
UPK2O00526 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.54□□□□□ -0.56
UPK2O00526 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
UPK2O00526 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.54□□□□□ -0.56
UPK2O00526 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
UPK2O00526 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK2O00526 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK2O00526 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
UPK2O00526 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.53□□□□□ -0.56
UPK2O00526 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.53□□□□□ -0.56
UPK2O00526 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 AP000812.2-201ENST00000538934 718 ntBASIC11.53□□□□□ -0.56
UPK2O00526 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 AL512310.5-201ENST00000551999 515 ntBASIC11.53□□□□□ -0.56
UPK2O00526 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 AP006547.1-201ENST00000563435 692 ntBASIC11.53□□□□□ -0.56
UPK2O00526 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.53□□□□□ -0.56
UPK2O00526 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.53□□□□□ -0.56
UPK2O00526 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 PDIA3P1-201ENST00000471856 1510 ntBASIC11.53□□□□□ -0.56
UPK2O00526 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
UPK2O00526 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
UPK2O00526 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
UPK2O00526 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 USP39-207ENST00000450066 2086 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
UPK2O00526 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
UPK2O00526 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.52□□□□□ -0.56
UPK2O00526 AC244394.1-201ENST00000435000 1665 ntBASIC11.52□□□□□ -0.56
UPK2O00526 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.52□□□□□ -0.56
UPK2O00526 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UPK2O00526 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
UPK2O00526 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.52□□□□□ -0.56
UPK2O00526 MARK2P9-201ENST00000430958 1727 ntBASIC11.52□□□□□ -0.56
UPK2O00526 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
UPK2O00526 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
UPK2O00526 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
UPK2O00526 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.52□□□□□ -0.57
UPK2O00526 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
UPK2O00526 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms