Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
NACAE9PAV3 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 AC004945.1-201ENST00000416738 983 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 ACTG1P3-201ENST00000431775 1114 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 KRT43P-201ENST00000434019 910 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC10.62□□□□□ -0.71
NACAE9PAV3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
NACAE9PAV3 KRT18P25-201ENST00000508931 1278 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC10.62□□□□□ -0.71
NACAE9PAV3 SALL4P5-201ENST00000419001 1760 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 RN7SL832P-201ENST00000607781 1756 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC10.62□□□□□ -0.71
NACAE9PAV3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
NACAE9PAV3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
NACAE9PAV3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC10.62□□□□□ -0.71
NACAE9PAV3 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC10.62□□□□□ -0.71
NACAE9PAV3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
NACAE9PAV3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 TUBB1P2-201ENST00000422712 1306 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 TUBB1P1-201ENST00000503144 1300 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.62□□□□□ -0.71
NACAE9PAV3 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
NACAE9PAV3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
NACAE9PAV3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
NACAE9PAV3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
NACAE9PAV3 KLF2P4-201ENST00000451959 1225 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.62□□□□□ -0.71
NACAE9PAV3 AC022494.1-201ENST00000466044 728 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC10.62□□□□□ -0.71
NACAE9PAV3 CLUHP6-201ENST00000580789 941 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC10.62□□□□□ -0.71
NACAE9PAV3 AC020910.6-201ENST00000623084 1459 ntBASIC10.62□□□□□ -0.71
NACAE9PAV3 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
NACAE9PAV3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
NACAE9PAV3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.62□□□□□ -0.71
NACAE9PAV3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC10.61□□□□□ -0.71
NACAE9PAV3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC10.61□□□□□ -0.71
NACAE9PAV3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NACAE9PAV3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms