Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HFM1A2PYH4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HFM1A2PYH4 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HFM1A2PYH4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HFM1A2PYH4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HFM1A2PYH4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HFM1A2PYH4 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HFM1A2PYH4 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 AC106827.1-201ENST00000366454 431 ntBASIC20.75■□□□□ 0.91
HFM1A2PYH4 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HFM1A2PYH4 DKKL1P1-201ENST00000400550 698 ntBASIC20.75■□□□□ 0.91
HFM1A2PYH4 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 RN7SKP155-201ENST00000516031 288 ntBASIC20.75■□□□□ 0.91
HFM1A2PYH4 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 ST5-261ENST00000626808 1071 ntTSL 5 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC20.75■□□□□ 0.91
HFM1A2PYH4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HFM1A2PYH4 AC111170.3-201ENST00000624282 2464 ntBASIC20.75■□□□□ 0.91
HFM1A2PYH4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HFM1A2PYH4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HFM1A2PYH4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HFM1A2PYH4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HFM1A2PYH4 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HFM1A2PYH4 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HFM1A2PYH4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HFM1A2PYH4 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HFM1A2PYH4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HFM1A2PYH4 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HFM1A2PYH4 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HFM1A2PYH4 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 KRT18P62-201ENST00000446618 1287 ntBASIC20.74■□□□□ 0.91
HFM1A2PYH4 KRT18P66-201ENST00000452970 1269 ntBASIC20.74■□□□□ 0.91
HFM1A2PYH4 PPIA-208ENST00000489459 907 ntTSL 2 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 MIR3940-201ENST00000579148 102 ntBASIC20.74■□□□□ 0.91
HFM1A2PYH4 AC012073.1-201ENST00000606114 1108 ntBASIC20.74■□□□□ 0.91
HFM1A2PYH4 PPIA-210ENST00000620047 827 ntTSL 5 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HFM1A2PYH4 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HFM1A2PYH4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
HFM1A2PYH4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HFM1A2PYH4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HFM1A2PYH4 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HFM1A2PYH4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HFM1A2PYH4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HFM1A2PYH4 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HFM1A2PYH4 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HFM1A2PYH4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HFM1A2PYH4 ACTG1P19-201ENST00000418987 1116 ntBASIC20.73■□□□□ 0.91
HFM1A2PYH4 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 RN7SL23P-201ENST00000484055 275 ntBASIC20.73■□□□□ 0.91
HFM1A2PYH4 COX5A-205ENST00000568517 582 ntTSL 3 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 AL356740.1-201ENST00000602192 1297 ntBASIC20.73■□□□□ 0.91
HFM1A2PYH4 CR392039.2-201ENST00000623182 509 ntBASIC20.73■□□□□ 0.91
HFM1A2PYH4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 Z98885.3-201ENST00000624882 1757 ntBASIC20.73■□□□□ 0.91
HFM1A2PYH4 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HFM1A2PYH4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HFM1A2PYH4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HFM1A2PYH4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HFM1A2PYH4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HFM1A2PYH4 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HFM1A2PYH4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HFM1A2PYH4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HFM1A2PYH4 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC20.72■□□□□ 0.91
HFM1A2PYH4 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms