Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCDC187A0A096LP49 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CCDC187A0A096LP49 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC187A0A096LP49 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CCDC187A0A096LP49 AC067931.2-201ENST00000623655 2003 ntBASIC13.52□□□□□ -0.24
CCDC187A0A096LP49 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.52□□□□□ -0.24
CCDC187A0A096LP49 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC187A0A096LP49 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.52□□□□□ -0.24
CCDC187A0A096LP49 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC187A0A096LP49 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.52□□□□□ -0.24
CCDC187A0A096LP49 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC187A0A096LP49 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC187A0A096LP49 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.52□□□□□ -0.24
CCDC187A0A096LP49 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 KRT17P4-201ENST00000429445 819 ntBASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 RN7SL494P-201ENST00000461517 304 ntBASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 AC005740.1-201ENST00000515639 522 ntBASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC187A0A096LP49 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC187A0A096LP49 MYADML-201ENST00000474610 2147 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms