Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 STK16-204ENST00000409638 2868 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 USP17L6P-201ENST00000382470 1197 ntBASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 KRT17P3-201ENST00000420566 1262 ntBASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AC007663.1-201ENST00000438948 1240 ntBASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AP005242.2-201ENST00000580065 1175 ntBASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AF186192.3-201ENST00000583427 947 ntBASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AC010653.2-201ENST00000623505 997 ntBASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AC116562.4-202ENST00000641738 218 ntBASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 IKZF1-210ENST00000439701 3572 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 TATDN2P2-201ENST00000403590 2226 ntBASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 CSF3R-202ENST00000361632 2847 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 JAK3-204ENST00000527670 3996 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 SLC22A14-202ENST00000448498 1827 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 GUCD1-213ENST00000621833 3584 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 INSC-201ENST00000379554 2954 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 ZNF300-205ENST00000446148 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AL118505.1-201ENST00000619370 1932 ntBASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 LINC00319-202ENST00000448049 3507 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 NLRP2-209ENST00000537859 3507 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 SPDYE5-202ENST00000624640 2667 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 AC080128.2-201ENST00000641520 11863 ntBASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 MMP2-203ENST00000543485 1978 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 L1CAM-201ENST00000361699 3888 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 AC073476.3-201ENST00000563949 2507 ntBASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 CU633980.1-201ENST00000613894 1708 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 AL354919.1-201ENST00000453837 2257 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 IRF5-208ENST00000473745 2282 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01558Q9Y6Z2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms