Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 CROT-203ENST00000419147 2959 ntTSL 2 BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 TBC1D3P6-201ENST00000505954 962 ntBASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 GGNBP1-204ENST00000613113 887 ntBASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 KRT8P42-201ENST00000405771 1399 ntBASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 WASH7P-201ENST00000488147 1351 ntBASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SHANK2Q9UPX8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 AC245140.2-201ENST00000624054 1939 ntBASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 RHOC-205ENST00000369636 786 ntTSL 2 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 SNORA50C-201ENST00000408535 133 ntBASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 AC010531.8-201ENST00000623341 685 ntBASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 SNORA50.1-201ENST00000628590 135 ntBASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHANK2Q9UPX8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHANK2Q9UPX8 AL513477.1-201ENST00000602865 2407 ntBASIC20.64■□□□□ 0.9
SHANK2Q9UPX8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 IFNWP2-201ENST00000431203 580 ntBASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 RPS18P9-201ENST00000482817 460 ntBASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 IGHEP2-201ENST00000519308 1256 ntBASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHANK2Q9UPX8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 BCL2L12P1-201ENST00000508390 733 ntBASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms