Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 AL662890.1-201ENST00000396818 632 ntBASIC15.22■□□□□ 0.03
CD248Q9HCU0 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 SLC9A3P3-201ENST00000457608 2229 ntBASIC15.22■□□□□ 0.03
CD248Q9HCU0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CD248Q9HCU0 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.22■□□□□ 0.03
CD248Q9HCU0 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 TUBBP5-203ENST00000508529 1334 ntBASIC15.21■□□□□ 0.03
CD248Q9HCU0 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 DPM3-202ENST00000368399 517 ntBASIC15.21■□□□□ 0.03
CD248Q9HCU0 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.21■□□□□ 0.03
CD248Q9HCU0 CYP46A4P-201ENST00000414953 267 ntBASIC15.21■□□□□ 0.03
CD248Q9HCU0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 EIF4HP1-201ENST00000453115 687 ntBASIC15.21■□□□□ 0.03
CD248Q9HCU0 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 AL645939.5-201ENST00000606834 243 ntBASIC15.21■□□□□ 0.03
CD248Q9HCU0 AL358472.3-201ENST00000608147 415 ntBASIC15.21■□□□□ 0.03
CD248Q9HCU0 AC138649.2-201ENST00000615886 705 ntBASIC15.21■□□□□ 0.03
CD248Q9HCU0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 AC114271.1-201ENST00000612689 2813 ntBASIC15.21■□□□□ 0.03
CD248Q9HCU0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 ACE3P-201ENST00000423435 1973 ntBASIC15.21■□□□□ 0.03
CD248Q9HCU0 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CD248Q9HCU0 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.21■□□□□ 0.03
CD248Q9HCU0 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.21■□□□□ 0.02
CD248Q9HCU0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CD248Q9HCU0 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CD248Q9HCU0 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CD248Q9HCU0 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CD248Q9HCU0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.21■□□□□ 0.02
CD248Q9HCU0 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CD248Q9HCU0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CD248Q9HCU0 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CD248Q9HCU0 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms