Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AL627422.1-201ENST00000434104 580 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AL161932.2-201ENST00000435436 679 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 NOC2LP1-201ENST00000450578 752 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC104784.1-201ENST00000473096 294 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC008267.1-201ENST00000474858 1069 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 CR383656.3-201ENST00000551315 183 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 MAX-218ENST00000557746 571 ntTSL 4 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 SORD2P-201ENST00000558556 1069 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC027237.1-201ENST00000560942 655 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC093752.3-201ENST00000567343 901 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AL021707.6-201ENST00000609212 491 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 WT1-AS_6.1-201ENST00000614919 121 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC051619.9-201ENST00000623237 597 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC009145.4-201ENST00000625119 1294 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC011491.1-203ENST00000637688 543 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 BX640514.1-201ENST00000583223 1918 ntBASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRTAP4-3Q9BYR4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms