Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
AP3S1Q92572 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S1Q92572 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S1Q92572 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S1Q92572 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.69□□□□□ -0.38
AP3S1Q92572 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.69□□□□□ -0.38
AP3S1Q92572 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S1Q92572 FAAHP1-202ENST00000446499 1238 ntBASIC12.69□□□□□ -0.38
AP3S1Q92572 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.69□□□□□ -0.38
AP3S1Q92572 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S1Q92572 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S1Q92572 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.69□□□□□ -0.38
AP3S1Q92572 AC005586.2-201ENST00000563946 837 ntBASIC12.69□□□□□ -0.38
AP3S1Q92572 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
AP3S1Q92572 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S1Q92572 AC107373.2-201ENST00000607735 490 ntBASIC12.69□□□□□ -0.38
AP3S1Q92572 AP001002.3-201ENST00000623482 206 ntBASIC12.69□□□□□ -0.38
AP3S1Q92572 AL109936.8-201ENST00000641772 604 ntBASIC12.69□□□□□ -0.38
AP3S1Q92572 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
AP3S1Q92572 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
AP3S1Q92572 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.69□□□□□ -0.38
AP3S1Q92572 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 DRD5P1-201ENST00000456605 1438 ntBASIC12.69□□□□□ -0.38
AP3S1Q92572 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
AP3S1Q92572 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S1Q92572 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.69□□□□□ -0.38
AP3S1Q92572 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
AP3S1Q92572 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S1Q92572 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S1Q92572 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
AP3S1Q92572 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 AC073869.1-201ENST00000415574 2762 ntBASIC12.68□□□□□ -0.38
AP3S1Q92572 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
AP3S1Q92572 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S1Q92572 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
AP3S1Q92572 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S1Q92572 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.68□□□□□ -0.38
AP3S1Q92572 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.68□□□□□ -0.38
AP3S1Q92572 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.68□□□□□ -0.38
AP3S1Q92572 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.68□□□□□ -0.38
AP3S1Q92572 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S1Q92572 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S1Q92572 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.68□□□□□ -0.38
AP3S1Q92572 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S1Q92572 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S1Q92572 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S1Q92572 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 AC104506.1-201ENST00000609247 429 ntBASIC12.68□□□□□ -0.38
AP3S1Q92572 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S1Q92572 CR392039.2-201ENST00000623182 509 ntBASIC12.68□□□□□ -0.38
AP3S1Q92572 BX539320.1-201ENST00000623759 877 ntBASIC12.68□□□□□ -0.38
AP3S1Q92572 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S1Q92572 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S1Q92572 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S1Q92572 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
AP3S1Q92572 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.68□□□□□ -0.38
AP3S1Q92572 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S1Q92572 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S1Q92572 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
AP3S1Q92572 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S1Q92572 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms