Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 RN7SKP214-201ENST00000364208 315 ntBASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 AC012618.1-201ENST00000461223 412 ntBASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 NUP210P1-202ENST00000504322 710 ntBASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 AL161670.2-201ENST00000557650 1227 ntBASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 RN7SL574P-201ENST00000581512 297 ntBASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 AC016629.1-201ENST00000596579 586 ntBASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 AP000346.4-201ENST00000614827 381 ntBASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDND2Q8NHS1 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 KRT8P19-201ENST00000551916 1455 ntBASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 AL035414.1-201ENST00000451327 857 ntBASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 SCARNA21-201ENST00000517026 139 ntBASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 AC090857.1-201ENST00000527400 390 ntBASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 AC009779.1-201ENST00000551138 283 ntBASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.28□□□□□ -0.44
CLDND2Q8NHS1 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms