Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CCDC168Q8NDH2 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 HNRNPA1P21-201ENST00000424115 961 ntBASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 AC103563.1-201ENST00000429316 123 ntBASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 IFNL3P1-201ENST00000595082 501 ntBASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 PRR20FP-201ENST00000603320 180 ntBASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 AC103702.1-201ENST00000548801 2630 ntBASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 MIR339-201ENST00000362153 94 ntBASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CCDC168Q8NDH2 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 AC133141.1-201ENST00000443015 339 ntBASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 BATF-202ENST00000555504 361 ntTSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC11.85□□□□□ -0.51
CCDC168Q8NDH2 AC073210.1-201ENST00000414799 232 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms