Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 AC107464.3-201ENST00000609172 737 ntBASIC15.98■□□□□ 0.15
TRIM50Q86XT4 AC104581.4-201ENST00000623126 3052 ntBASIC15.98■□□□□ 0.15
TRIM50Q86XT4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 AC067931.2-201ENST00000623655 2003 ntBASIC15.98■□□□□ 0.15
TRIM50Q86XT4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.98■□□□□ 0.15
TRIM50Q86XT4 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 Z69890.1-201ENST00000382990 339 ntBASIC15.97■□□□□ 0.15
TRIM50Q86XT4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 AC130709.1-201ENST00000484779 1212 ntBASIC15.97■□□□□ 0.15
TRIM50Q86XT4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 MIR3180-2-201ENST00000581748 88 ntBASIC15.97■□□□□ 0.15
TRIM50Q86XT4 MIR4750-201ENST00000584564 56 ntBASIC15.97■□□□□ 0.15
TRIM50Q86XT4 AC073911.3-201ENST00000624401 631 ntBASIC15.97■□□□□ 0.15
TRIM50Q86XT4 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 AC106881.1-201ENST00000605849 3329 ntBASIC15.97■□□□□ 0.15
TRIM50Q86XT4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM50Q86XT4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 LINC00115-201ENST00000473798 1317 ntBASIC15.96■□□□□ 0.15
TRIM50Q86XT4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 RN7SL832P-201ENST00000607781 1756 ntBASIC15.96■□□□□ 0.15
TRIM50Q86XT4 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 RPL7P35-201ENST00000446943 740 ntBASIC15.96■□□□□ 0.15
TRIM50Q86XT4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 TMCO5B-205ENST00000530020 894 ntBASIC15.96■□□□□ 0.15
TRIM50Q86XT4 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 AC005041.3-201ENST00000606287 649 ntBASIC15.96■□□□□ 0.15
TRIM50Q86XT4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 AC087392.5-201ENST00000612517 489 ntBASIC15.96■□□□□ 0.15
TRIM50Q86XT4 AP001184.1-201ENST00000637936 376 ntBASIC15.96■□□□□ 0.15
TRIM50Q86XT4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM50Q86XT4 AC012617.1-204ENST00000586340 2305 ntBASIC15.96■□□□□ 0.15
TRIM50Q86XT4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms