Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 LINC01230-201ENST00000625222 3017 ntBASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 HSPA8P5-201ENST00000456928 2069 ntBASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 RN7SL530P-201ENST00000485097 298 ntBASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 AC134698.3-201ENST00000523880 214 ntBASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 RHOQP1-201ENST00000555758 579 ntBASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 AC140658.4-201ENST00000561990 352 ntBASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 AL022334.2-201ENST00000610000 484 ntBASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 AL353770.1-201ENST00000614915 403 ntBASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 MIR6769A-201ENST00000617340 73 ntBASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PRAMEF20Q5VT98 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 ELK2AP-201ENST00000392510 1007 ntBASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 IGLV3-15-201ENST00000518356 244 ntBASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 MIR4754-201ENST00000582477 89 ntBASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 AC104506.1-201ENST00000609247 429 ntBASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PRAMEF20Q5VT98 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
PRAMEF20Q5VT98 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms