Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP7AQ04656 TUBB4AP1-201ENST00000450755 1325 ntBASIC20.53■□□□□ 0.88
ATP7AQ04656 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP7AQ04656 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC20.53■□□□□ 0.88
ATP7AQ04656 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP7AQ04656 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATP7AQ04656 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP7AQ04656 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP7AQ04656 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ATP7AQ04656 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP7AQ04656 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP7AQ04656 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
ATP7AQ04656 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP7AQ04656 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ATP7AQ04656 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
ATP7AQ04656 AL359092.2-201ENST00000423330 585 ntBASIC20.53■□□□□ 0.88
ATP7AQ04656 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC20.53■□□□□ 0.88
ATP7AQ04656 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
ATP7AQ04656 KRT8P25-201ENST00000473150 1456 ntBASIC20.52■□□□□ 0.88
ATP7AQ04656 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.52■□□□□ 0.88
ATP7AQ04656 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
ATP7AQ04656 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC20.52■□□□□ 0.88
ATP7AQ04656 KRT8P38-201ENST00000441370 1430 ntBASIC20.52■□□□□ 0.88
ATP7AQ04656 AC015802.1-201ENST00000588104 1449 ntBASIC20.52■□□□□ 0.88
ATP7AQ04656 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ATP7AQ04656 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP7AQ04656 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC20.52■□□□□ 0.88
ATP7AQ04656 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP7AQ04656 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC20.52■□□□□ 0.87
ATP7AQ04656 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP7AQ04656 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
ATP7AQ04656 DNM1P46-202ENST00000415963 882 ntBASIC20.52■□□□□ 0.87
ATP7AQ04656 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC20.52■□□□□ 0.87
ATP7AQ04656 RPL14-203ENST00000416518 812 ntTSL 3 BASIC20.52■□□□□ 0.87
ATP7AQ04656 HNRNPA1P25-201ENST00000422644 937 ntBASIC20.52■□□□□ 0.87
ATP7AQ04656 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC20.52■□□□□ 0.87
ATP7AQ04656 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC20.52■□□□□ 0.87
ATP7AQ04656 AC106782.5-201ENST00000616011 337 ntBASIC20.52■□□□□ 0.87
ATP7AQ04656 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC20.52■□□□□ 0.87
ATP7AQ04656 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP7AQ04656 HSPA7-201ENST00000445535 1927 ntBASIC20.52■□□□□ 0.87
ATP7AQ04656 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATP7AQ04656 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
ATP7AQ04656 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC20.52■□□□□ 0.87
ATP7AQ04656 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP7AQ04656 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP7AQ04656 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP7AQ04656 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP7AQ04656 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP7AQ04656 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP7AQ04656 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ATP7AQ04656 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP7AQ04656 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP7AQ04656 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP7AQ04656 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP7AQ04656 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ATP7AQ04656 SNX15-201ENST00000352068 771 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP7AQ04656 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP7AQ04656 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP7AQ04656 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP7AQ04656 SNRPCP15-201ENST00000424055 192 ntBASIC20.51■□□□□ 0.87
ATP7AQ04656 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC20.51■□□□□ 0.87
ATP7AQ04656 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP7AQ04656 MBP-230ENST00000528160 584 ntTSL 5 BASIC20.51■□□□□ 0.87
ATP7AQ04656 RN7SL480P-201ENST00000581481 294 ntBASIC20.51■□□□□ 0.87
ATP7AQ04656 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC20.51■□□□□ 0.87
ATP7AQ04656 AC137723.2-201ENST00000623540 398 ntBASIC20.51■□□□□ 0.87
ATP7AQ04656 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP7AQ04656 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP7AQ04656 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP7AQ04656 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP7AQ04656 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
ATP7AQ04656 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP7AQ04656 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP7AQ04656 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP7AQ04656 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC20.5■□□□□ 0.87
ATP7AQ04656 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP7AQ04656 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC20.5■□□□□ 0.87
ATP7AQ04656 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
ATP7AQ04656 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
ATP7AQ04656 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC20.5■□□□□ 0.87
ATP7AQ04656 HLA-W-207ENST00000439514 771 ntBASIC20.5■□□□□ 0.87
ATP7AQ04656 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC20.5■□□□□ 0.87
ATP7AQ04656 TPT1P6-201ENST00000458298 514 ntBASIC20.5■□□□□ 0.87
ATP7AQ04656 AC023051.2-201ENST00000541141 460 ntBASIC20.5■□□□□ 0.87
ATP7AQ04656 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP7AQ04656 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC20.5■□□□□ 0.87
ATP7AQ04656 RN7SL440P-201ENST00000577855 343 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms