Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDK5Q00535 POM121L14P-201ENST00000406100 1558 ntBASIC12.97□□□□□ -0.33
CDK5Q00535 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CDK5Q00535 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CDK5Q00535 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CDK5Q00535 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDK5Q00535 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.97□□□□□ -0.33
CDK5Q00535 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDK5Q00535 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDK5Q00535 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDK5Q00535 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.97□□□□□ -0.33
CDK5Q00535 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDK5Q00535 AC061965.1-201ENST00000560524 1465 ntBASIC12.97□□□□□ -0.33
CDK5Q00535 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.97□□□□□ -0.33
CDK5Q00535 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDK5Q00535 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDK5Q00535 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.96□□□□□ -0.33
CDK5Q00535 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CDK5Q00535 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 SALL4P6-201ENST00000429385 1691 ntBASIC12.96□□□□□ -0.33
CDK5Q00535 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
CDK5Q00535 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.96□□□□□ -0.33
CDK5Q00535 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
CDK5Q00535 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.96□□□□□ -0.33
CDK5Q00535 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CDK5Q00535 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 AL136309.1-201ENST00000403917 691 ntBASIC12.96□□□□□ -0.33
CDK5Q00535 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CDK5Q00535 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 RFPL4AP1-201ENST00000530883 850 ntBASIC12.96□□□□□ -0.33
CDK5Q00535 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CDK5Q00535 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CDK5Q00535 AL512310.5-201ENST00000551999 515 ntBASIC12.96□□□□□ -0.33
CDK5Q00535 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.96□□□□□ -0.33
CDK5Q00535 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.96□□□□□ -0.33
CDK5Q00535 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.96□□□□□ -0.33
CDK5Q00535 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.96□□□□□ -0.33
CDK5Q00535 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.96□□□□□ -0.33
CDK5Q00535 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.96□□□□□ -0.33
CDK5Q00535 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CDK5Q00535 AC021016.3-201ENST00000608367 477 ntBASIC12.96□□□□□ -0.33
CDK5Q00535 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.96□□□□□ -0.33
CDK5Q00535 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDK5Q00535 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
CDK5Q00535 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.96□□□□□ -0.34
CDK5Q00535 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CDK5Q00535 RCC2P1-201ENST00000452257 1476 ntBASIC12.96□□□□□ -0.34
CDK5Q00535 AC007952.5-201ENST00000572818 1486 ntBASIC12.96□□□□□ -0.34
CDK5Q00535 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.96□□□□□ -0.34
CDK5Q00535 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CDK5Q00535 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.96□□□□□ -0.34
CDK5Q00535 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CDK5Q00535 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.96□□□□□ -0.34
CDK5Q00535 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.96□□□□□ -0.34
CDK5Q00535 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CDK5Q00535 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.96□□□□□ -0.34
CDK5Q00535 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CDK5Q00535 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDK5Q00535 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDK5Q00535 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDK5Q00535 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.95□□□□□ -0.34
CDK5Q00535 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.95□□□□□ -0.34
CDK5Q00535 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CDK5Q00535 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CDK5Q00535 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CDK5Q00535 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDK5Q00535 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDK5Q00535 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDK5Q00535 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDK5Q00535 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDK5Q00535 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDK5Q00535 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDK5Q00535 PCDHB18P-202ENST00000526308 3197 ntBASIC12.95□□□□□ -0.34
CDK5Q00535 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDK5Q00535 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.95□□□□□ -0.34
CDK5Q00535 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.95□□□□□ -0.34
CDK5Q00535 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CDK5Q00535 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms