Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC004554.1-201ENST00000422830 1468 ntBASIC16.16■□□□□ 0.18
CCNA1P78396 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.16■□□□□ 0.18
CCNA1P78396 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.16■□□□□ 0.18
CCNA1P78396 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.16■□□□□ 0.18
CCNA1P78396 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCNA1P78396 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.16■□□□□ 0.18
CCNA1P78396 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC16.16■□□□□ 0.18
CCNA1P78396 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CCNA1P78396 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 AC023157.3-201ENST00000619086 2088 ntBASIC16.16■□□□□ 0.18
CCNA1P78396 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 OR2W2P-201ENST00000406313 909 ntBASIC16.16■□□□□ 0.18
CCNA1P78396 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CCNA1P78396 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.16■□□□□ 0.18
CCNA1P78396 KRT18P46-201ENST00000435568 1279 ntBASIC16.16■□□□□ 0.18
CCNA1P78396 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.16■□□□□ 0.18
CCNA1P78396 DDX39AP1-201ENST00000445147 1181 ntBASIC16.16■□□□□ 0.18
CCNA1P78396 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC16.16■□□□□ 0.18
CCNA1P78396 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.16■□□□□ 0.18
CCNA1P78396 BPIFB5P-201ENST00000457066 1099 ntBASIC16.16■□□□□ 0.18
CCNA1P78396 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.16■□□□□ 0.18
CCNA1P78396 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.16■□□□□ 0.18
CCNA1P78396 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.16■□□□□ 0.18
CCNA1P78396 AL132994.1-201ENST00000554098 400 ntBASIC16.16■□□□□ 0.18
CCNA1P78396 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CCNA1P78396 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.16■□□□□ 0.18
CCNA1P78396 CES1P2-201ENST00000566467 1242 ntBASIC16.16■□□□□ 0.18
CCNA1P78396 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.16■□□□□ 0.18
CCNA1P78396 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.16■□□□□ 0.18
CCNA1P78396 AC006548.2-201ENST00000605217 529 ntBASIC16.16■□□□□ 0.18
CCNA1P78396 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.16■□□□□ 0.18
CCNA1P78396 AC013268.4-201ENST00000637413 2228 ntBASIC16.16■□□□□ 0.18
CCNA1P78396 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.16■□□□□ 0.18
CCNA1P78396 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CCNA1P78396 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCNA1P78396 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.16■□□□□ 0.18
CCNA1P78396 TBC1D27-202ENST00000424239 1573 ntBASIC16.16■□□□□ 0.18
CCNA1P78396 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CCNA1P78396 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 AL590824.1-201ENST00000403828 1349 ntBASIC16.16■□□□□ 0.18
CCNA1P78396 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CCNA1P78396 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCNA1P78396 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCNA1P78396 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.15■□□□□ 0.18
CCNA1P78396 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.15■□□□□ 0.18
CCNA1P78396 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CCNA1P78396 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCNA1P78396 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.15■□□□□ 0.18
CCNA1P78396 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.15■□□□□ 0.18
CCNA1P78396 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CCNA1P78396 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.15■□□□□ 0.18
CCNA1P78396 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.15■□□□□ 0.18
CCNA1P78396 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CCNA1P78396 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 SERF2-206ENST00000409291 807 ntTSL 3 BASIC16.15■□□□□ 0.18
CCNA1P78396 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC16.15■□□□□ 0.18
CCNA1P78396 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.15■□□□□ 0.18
CCNA1P78396 ASS1P2-201ENST00000439895 1223 ntBASIC16.15■□□□□ 0.18
CCNA1P78396 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.15■□□□□ 0.18
CCNA1P78396 AC026470.1-201ENST00000478038 846 ntBASIC16.15■□□□□ 0.18
CCNA1P78396 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.15■□□□□ 0.18
CCNA1P78396 EEF1GP8-201ENST00000506566 1154 ntBASIC16.15■□□□□ 0.18
CCNA1P78396 FAM86KP-201ENST00000509817 987 ntBASIC16.15■□□□□ 0.18
CCNA1P78396 AC093300.1-201ENST00000510368 1201 ntBASIC16.15■□□□□ 0.18
CCNA1P78396 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.15■□□□□ 0.18
CCNA1P78396 AC103702.1-201ENST00000548801 2630 ntBASIC16.15■□□□□ 0.18
CCNA1P78396 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCNA1P78396 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.15■□□□□ 0.18
CCNA1P78396 AC138761.6-201ENST00000583997 1423 ntBASIC16.15■□□□□ 0.18
CCNA1P78396 AC005777.1-201ENST00000588332 187 ntBASIC16.15■□□□□ 0.18
CCNA1P78396 CYP4F36P-201ENST00000589193 186 ntBASIC16.15■□□□□ 0.18
CCNA1P78396 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CCNA1P78396 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCNA1P78396 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms