Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CNTNAP1P78357 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.75■□□□□ 0.27
CNTNAP1P78357 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNTNAP1P78357 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNTNAP1P78357 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CNTNAP1P78357 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 RN7SL832P-201ENST00000607781 1756 ntBASIC16.74■□□□□ 0.27
CNTNAP1P78357 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 TREX1-203ENST00000456089 629 ntTSL 3 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 AC004923.3-201ENST00000527532 355 ntBASIC16.74■□□□□ 0.27
CNTNAP1P78357 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 MIR4746-201ENST00000579802 71 ntBASIC16.74■□□□□ 0.27
CNTNAP1P78357 AC005777.1-201ENST00000588332 187 ntBASIC16.74■□□□□ 0.27
CNTNAP1P78357 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CNTNAP1P78357 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.74■□□□□ 0.27
CNTNAP1P78357 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 RN7SL69P-201ENST00000468423 272 ntBASIC16.73■□□□□ 0.27
CNTNAP1P78357 SNRPD2P2-201ENST00000473818 333 ntBASIC16.73■□□□□ 0.27
CNTNAP1P78357 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 RN7SKP155-201ENST00000516031 288 ntBASIC16.73■□□□□ 0.27
CNTNAP1P78357 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 AC005746.3-201ENST00000614751 393 ntBASIC16.73■□□□□ 0.27
CNTNAP1P78357 AC073869.4-201ENST00000620841 800 ntBASIC16.73■□□□□ 0.27
CNTNAP1P78357 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CNTNAP1P78357 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.73■□□□□ 0.27
CNTNAP1P78357 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNTNAP1P78357 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNTNAP1P78357 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 AL022313.4-201ENST00000562756 2046 ntBASIC16.72■□□□□ 0.27
CNTNAP1P78357 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNTNAP1P78357 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNTNAP1P78357 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CNTNAP1P78357 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CNTNAP1P78357 FAM21EP-201ENST00000417804 985 ntBASIC16.72■□□□□ 0.27
CNTNAP1P78357 SAP18P2-201ENST00000434334 459 ntBASIC16.72■□□□□ 0.27
CNTNAP1P78357 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.72■□□□□ 0.27
CNTNAP1P78357 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms