Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
AP1S1P61966 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.42□□□□□ -0.1
AP1S1P61966 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.42□□□□□ -0.1
AP1S1P61966 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.42□□□□□ -0.1
AP1S1P61966 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
AP1S1P61966 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
AP1S1P61966 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AP1S1P61966 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.41□□□□□ -0.1
AP1S1P61966 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AP1S1P61966 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.41□□□□□ -0.1
AP1S1P61966 SBF1P1-201ENST00000444527 5631 ntBASIC14.41□□□□□ -0.1
AP1S1P61966 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
AP1S1P61966 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.41□□□□□ -0.1
AP1S1P61966 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.41□□□□□ -0.1
AP1S1P61966 SLC25A24P2-201ENST00000415059 510 ntBASIC14.41□□□□□ -0.1
AP1S1P61966 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.41□□□□□ -0.1
AP1S1P61966 IGHJ2P-201ENST00000454480 60 ntBASIC14.41□□□□□ -0.1
AP1S1P61966 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.41□□□□□ -0.1
AP1S1P61966 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
AP1S1P61966 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.41□□□□□ -0.1
AP1S1P61966 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 PHBP15-201ENST00000574228 665 ntBASIC14.41□□□□□ -0.1
AP1S1P61966 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S1P61966 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S1P61966 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AP1S1P61966 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.41□□□□□ -0.1
AP1S1P61966 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.41□□□□□ -0.1
AP1S1P61966 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
AP1S1P61966 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP1S1P61966 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
AP1S1P61966 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
AP1S1P61966 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
AP1S1P61966 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.4□□□□□ -0.1
AP1S1P61966 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
AP1S1P61966 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
AP1S1P61966 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S1P61966 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S1P61966 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.4□□□□□ -0.1
AP1S1P61966 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S1P61966 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.4□□□□□ -0.1
AP1S1P61966 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
AP1S1P61966 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.4□□□□□ -0.1
AP1S1P61966 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.4□□□□□ -0.1
AP1S1P61966 BANF1P3-201ENST00000412556 261 ntBASIC14.4□□□□□ -0.1
AP1S1P61966 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.4□□□□□ -0.1
AP1S1P61966 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
AP1S1P61966 GOLGA2P8-201ENST00000505201 779 ntBASIC14.4□□□□□ -0.1
AP1S1P61966 AC245884.6-201ENST00000515672 1067 ntBASIC14.4□□□□□ -0.1
AP1S1P61966 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S1P61966 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.4□□□□□ -0.1
AP1S1P61966 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S1P61966 RN7SL574P-201ENST00000581512 297 ntBASIC14.4□□□□□ -0.1
AP1S1P61966 AL109837.1-201ENST00000603272 613 ntBASIC14.4□□□□□ -0.1
AP1S1P61966 BAP1-211ENST00000615113 489 ntBASIC14.4□□□□□ -0.1
AP1S1P61966 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S1P61966 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
AP1S1P61966 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms