Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.7□□□□□ -0.38
SEC61A1P61619 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SEC61A1P61619 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SEC61A1P61619 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 AL360270.3-201ENST00000609118 1348 ntBASIC12.69□□□□□ -0.38
SEC61A1P61619 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.69□□□□□ -0.38
SEC61A1P61619 AL157414.3-201ENST00000624276 1954 ntBASIC12.69□□□□□ -0.38
SEC61A1P61619 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SEC61A1P61619 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.69□□□□□ -0.38
SEC61A1P61619 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 LRRC59-203ENST00000576448 1531 ntBASIC12.69□□□□□ -0.38
SEC61A1P61619 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SEC61A1P61619 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.69□□□□□ -0.38
SEC61A1P61619 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
SEC61A1P61619 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.69□□□□□ -0.38
SEC61A1P61619 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
SEC61A1P61619 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.69□□□□□ -0.38
SEC61A1P61619 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SEC61A1P61619 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.69□□□□□ -0.38
SEC61A1P61619 AC026954.1-201ENST00000429771 1293 ntBASIC12.69□□□□□ -0.38
SEC61A1P61619 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SEC61A1P61619 CSF2RBP1-201ENST00000447905 391 ntBASIC12.69□□□□□ -0.38
SEC61A1P61619 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
SEC61A1P61619 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.69□□□□□ -0.38
SEC61A1P61619 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.69□□□□□ -0.38
SEC61A1P61619 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.69□□□□□ -0.38
SEC61A1P61619 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SEC61A1P61619 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.69□□□□□ -0.38
SEC61A1P61619 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SEC61A1P61619 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.69□□□□□ -0.38
SEC61A1P61619 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SEC61A1P61619 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.69□□□□□ -0.38
SEC61A1P61619 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SEC61A1P61619 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SEC61A1P61619 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SEC61A1P61619 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC61A1P61619 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
SEC61A1P61619 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SEC61A1P61619 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.68□□□□□ -0.38
SEC61A1P61619 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.68□□□□□ -0.38
SEC61A1P61619 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SEC61A1P61619 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms