Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 VDAC1P1-201ENST00000439229 848 ntBASIC16.51■□□□□ 0.23
CHMP4BP1P59074 HLA-J-204ENST00000495278 958 ntBASIC16.51■□□□□ 0.23
CHMP4BP1P59074 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 AC009779.1-201ENST00000551138 283 ntBASIC16.51■□□□□ 0.23
CHMP4BP1P59074 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 AL132994.2-201ENST00000603120 687 ntBASIC16.51■□□□□ 0.23
CHMP4BP1P59074 AP000346.4-201ENST00000614827 381 ntBASIC16.51■□□□□ 0.23
CHMP4BP1P59074 AL353770.1-201ENST00000614915 403 ntBASIC16.51■□□□□ 0.23
CHMP4BP1P59074 AC027601.3-201ENST00000622907 509 ntBASIC16.51■□□□□ 0.23
CHMP4BP1P59074 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 AC152010.1-201ENST00000415779 2006 ntBASIC16.51■□□□□ 0.23
CHMP4BP1P59074 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHMP4BP1P59074 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 AL359881.3-201ENST00000602640 1721 ntBASIC16.5■□□□□ 0.23
CHMP4BP1P59074 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 PDIA3P2-201ENST00000428073 158 ntBASIC16.5■□□□□ 0.23
CHMP4BP1P59074 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 CICP12-201ENST00000455801 843 ntBASIC16.5■□□□□ 0.23
CHMP4BP1P59074 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP4BP1P59074 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP4BP1P59074 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP4BP1P59074 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms