Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CAV3P56539 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.9□□□□□ -0.34
CAV3P56539 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.9□□□□□ -0.34
CAV3P56539 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 AL442647.2-201ENST00000429864 857 ntBASIC12.9□□□□□ -0.34
CAV3P56539 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.9□□□□□ -0.34
CAV3P56539 API5-211ENST00000534695 560 ntTSL 5 BASIC12.9□□□□□ -0.34
CAV3P56539 AC140912.1-201ENST00000577171 1054 ntBASIC12.9□□□□□ -0.34
CAV3P56539 AC138761.1-201ENST00000584393 385 ntBASIC12.9□□□□□ -0.34
CAV3P56539 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.9□□□□□ -0.34
CAV3P56539 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CAV3P56539 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.9□□□□□ -0.34
CAV3P56539 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CAV3P56539 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CAV3P56539 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CAV3P56539 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CAV3P56539 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.9□□□□□ -0.35
CAV3P56539 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
CAV3P56539 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CAV3P56539 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 KRT8P35-201ENST00000483942 1338 ntBASIC12.89□□□□□ -0.35
CAV3P56539 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CAV3P56539 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CAV3P56539 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CAV3P56539 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CAV3P56539 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.89□□□□□ -0.35
CAV3P56539 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 AP000437.1-201ENST00000624057 2085 ntBASIC12.89□□□□□ -0.35
CAV3P56539 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.89□□□□□ -0.35
CAV3P56539 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CAV3P56539 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
CAV3P56539 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.89□□□□□ -0.35
CAV3P56539 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CAV3P56539 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CAV3P56539 CRB3P1-201ENST00000449338 276 ntBASIC12.89□□□□□ -0.35
CAV3P56539 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.89□□□□□ -0.35
CAV3P56539 AC123567.1-201ENST00000548294 1261 ntBASIC12.89□□□□□ -0.35
CAV3P56539 AC190387.1-201ENST00000551683 408 ntBASIC12.89□□□□□ -0.35
CAV3P56539 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.89□□□□□ -0.35
CAV3P56539 BRI3BPP1-201ENST00000594224 787 ntBASIC12.89□□□□□ -0.35
CAV3P56539 AC027307.3-201ENST00000594262 1100 ntBASIC12.89□□□□□ -0.35
CAV3P56539 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.89□□□□□ -0.35
CAV3P56539 TMEM261P1-201ENST00000604899 340 ntBASIC12.89□□□□□ -0.35
CAV3P56539 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.89□□□□□ -0.35
CAV3P56539 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CAV3P56539 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CAV3P56539 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CAV3P56539 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.89□□□□□ -0.35
CAV3P56539 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CAV3P56539 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.89□□□□□ -0.35
CAV3P56539 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CAV3P56539 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 AL928654.5-201ENST00000624831 2501 ntBASIC12.89□□□□□ -0.35
CAV3P56539 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CAV3P56539 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CAV3P56539 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.89□□□□□ -0.35
CAV3P56539 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CAV3P56539 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CAV3P56539 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CAV3P56539 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CAV3P56539 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.88□□□□□ -0.35
CAV3P56539 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CAV3P56539 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.88□□□□□ -0.35
CAV3P56539 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CAV3P56539 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CAV3P56539 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
CAV3P56539 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CAV3P56539 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.88□□□□□ -0.35
CAV3P56539 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms