Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC10.7□□□□□ -0.7
CMC4P56277 AC006987.1-201ENST00000413610 527 ntBASIC10.7□□□□□ -0.7
CMC4P56277 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC10.7□□□□□ -0.7
CMC4P56277 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 RERG-205ENST00000537647 935 ntTSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC10.7□□□□□ -0.7
CMC4P56277 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC10.7□□□□□ -0.7
CMC4P56277 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 AL645939.5-201ENST00000606834 243 ntBASIC10.7□□□□□ -0.7
CMC4P56277 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC10.7□□□□□ -0.7
CMC4P56277 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
CMC4P56277 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 GOLGA8DP-202ENST00000341390 2184 ntBASIC10.7□□□□□ -0.7
CMC4P56277 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CMC4P56277 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
CMC4P56277 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
CMC4P56277 BX640514.1-201ENST00000583223 1918 ntBASIC10.7□□□□□ -0.7
CMC4P56277 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CMC4P56277 AC103702.1-201ENST00000548801 2630 ntBASIC10.7□□□□□ -0.7
CMC4P56277 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CMC4P56277 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC10.69□□□□□ -0.7
CMC4P56277 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC10.69□□□□□ -0.7
CMC4P56277 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
CMC4P56277 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC10.69□□□□□ -0.7
CMC4P56277 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CMC4P56277 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.69□□□□□ -0.7
CMC4P56277 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
CMC4P56277 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CMC4P56277 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC10.69□□□□□ -0.7
CMC4P56277 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CMC4P56277 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC10.69□□□□□ -0.7
CMC4P56277 NME6-203ENST00000415644 849 ntTSL 2 BASIC10.69□□□□□ -0.7
CMC4P56277 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC10.69□□□□□ -0.7
CMC4P56277 DUX4L50-201ENST00000455245 715 ntBASIC10.69□□□□□ -0.7
CMC4P56277 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC10.69□□□□□ -0.7
CMC4P56277 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC10.69□□□□□ -0.7
CMC4P56277 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
CMC4P56277 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
CMC4P56277 ARL16-210ENST00000574938 751 ntTSL 2 BASIC10.69□□□□□ -0.7
CMC4P56277 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC10.69□□□□□ -0.7
CMC4P56277 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC10.69□□□□□ -0.7
CMC4P56277 AL157813.1-201ENST00000612996 587 ntBASIC10.69□□□□□ -0.7
CMC4P56277 LINC01783-202ENST00000614408 828 ntBASIC10.69□□□□□ -0.7
CMC4P56277 BX284668.2-205ENST00000619677 828 ntBASIC10.69□□□□□ -0.7
CMC4P56277 DDX5-235ENST00000630471 473 ntTSL 4 BASIC10.69□□□□□ -0.7
CMC4P56277 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CMC4P56277 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CMC4P56277 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
CMC4P56277 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
CMC4P56277 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CMC4P56277 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms