Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC019193.1-201ENST00000506678 823 ntBASIC10.54□□□□□ -0.72
APOC4P55056 AC114947.1-202ENST00000514136 344 ntBASIC10.54□□□□□ -0.72
APOC4P55056 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
APOC4P55056 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC10.54□□□□□ -0.72
APOC4P55056 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC10.54□□□□□ -0.72
APOC4P55056 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
APOC4P55056 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
APOC4P55056 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
APOC4P55056 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.54□□□□□ -0.72
APOC4P55056 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
APOC4P55056 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC10.53□□□□□ -0.72
APOC4P55056 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC10.53□□□□□ -0.72
APOC4P55056 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC10.53□□□□□ -0.72
APOC4P55056 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
APOC4P55056 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 AP002353.1-201ENST00000528257 1599 ntBASIC10.53□□□□□ -0.72
APOC4P55056 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC10.53□□□□□ -0.72
APOC4P55056 PARVG-202ENST00000415224 999 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC10.53□□□□□ -0.72
APOC4P55056 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC10.53□□□□□ -0.72
APOC4P55056 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 RPL8P2-201ENST00000430538 502 ntBASIC10.53□□□□□ -0.72
APOC4P55056 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC10.53□□□□□ -0.72
APOC4P55056 DUTP3-201ENST00000450025 415 ntBASIC10.53□□□□□ -0.72
APOC4P55056 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC10.53□□□□□ -0.72
APOC4P55056 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC10.53□□□□□ -0.72
APOC4P55056 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
APOC4P55056 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC10.53□□□□□ -0.72
APOC4P55056 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 AC026803.1-201ENST00000569130 274 ntBASIC10.53□□□□□ -0.72
APOC4P55056 PHBP15-201ENST00000574228 665 ntBASIC10.53□□□□□ -0.72
APOC4P55056 RN7SL190P-201ENST00000582519 257 ntBASIC10.53□□□□□ -0.72
APOC4P55056 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC10.53□□□□□ -0.72
APOC4P55056 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC10.53□□□□□ -0.72
APOC4P55056 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 AC007326.1-201ENST00000604539 458 ntBASIC10.53□□□□□ -0.72
APOC4P55056 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC10.53□□□□□ -0.72
APOC4P55056 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms