Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MRE11P49959 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC16.86■□□□□ 0.29
MRE11P49959 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC16.86■□□□□ 0.29
MRE11P49959 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.86■□□□□ 0.29
MRE11P49959 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.86■□□□□ 0.29
MRE11P49959 AL391647.1-201ENST00000395664 511 ntBASIC16.86■□□□□ 0.29
MRE11P49959 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.86■□□□□ 0.29
MRE11P49959 SLC25A24P2-201ENST00000415059 510 ntBASIC16.86■□□□□ 0.29
MRE11P49959 HLA-V-204ENST00000476601 1289 ntBASIC16.86■□□□□ 0.29
MRE11P49959 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.86■□□□□ 0.29
MRE11P49959 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.86■□□□□ 0.29
MRE11P49959 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.86■□□□□ 0.29
MRE11P49959 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.86■□□□□ 0.29
MRE11P49959 AC004840.1-201ENST00000636359 365 ntBASIC16.86■□□□□ 0.29
MRE11P49959 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 MARK2P9-201ENST00000430958 1727 ntBASIC16.86■□□□□ 0.29
MRE11P49959 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
MRE11P49959 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.86■□□□□ 0.29
MRE11P49959 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.86■□□□□ 0.29
MRE11P49959 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
MRE11P49959 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRE11P49959 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 AC009474.1-201ENST00000455096 1565 ntBASIC16.85■□□□□ 0.29
MRE11P49959 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.85■□□□□ 0.29
MRE11P49959 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC16.85■□□□□ 0.29
MRE11P49959 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MRE11P49959 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MRE11P49959 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC16.85■□□□□ 0.29
MRE11P49959 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.85■□□□□ 0.29
MRE11P49959 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC16.85■□□□□ 0.29
MRE11P49959 AL137783.1-201ENST00000623494 1896 ntBASIC16.85■□□□□ 0.29
MRE11P49959 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
MRE11P49959 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.85■□□□□ 0.29
MRE11P49959 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.85■□□□□ 0.29
MRE11P49959 BTBD6P1-201ENST00000412176 1267 ntBASIC16.85■□□□□ 0.29
MRE11P49959 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.85■□□□□ 0.29
MRE11P49959 GPAA1P2-201ENST00000417923 928 ntBASIC16.85■□□□□ 0.29
MRE11P49959 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.85■□□□□ 0.29
MRE11P49959 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.85■□□□□ 0.29
MRE11P49959 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MRE11P49959 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.85■□□□□ 0.29
MRE11P49959 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.85■□□□□ 0.29
MRE11P49959 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MRE11P49959 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.85■□□□□ 0.29
MRE11P49959 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MRE11P49959 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.85■□□□□ 0.29
MRE11P49959 KRT8P14-201ENST00000414254 1442 ntBASIC16.85■□□□□ 0.29
MRE11P49959 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.85■□□□□ 0.29
MRE11P49959 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
MRE11P49959 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRE11P49959 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC16.85■□□□□ 0.29
MRE11P49959 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC16.85■□□□□ 0.29
MRE11P49959 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC16.84■□□□□ 0.29
MRE11P49959 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC16.84■□□□□ 0.29
MRE11P49959 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC16.84■□□□□ 0.29
MRE11P49959 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.84■□□□□ 0.29
MRE11P49959 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms