Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AC233701.1-201ENST00000571452 4204 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 CCT6P3-202ENST00000426828 2238 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 HM13-224ENST00000498035 3932 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 CORO2A-201ENST00000343933 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 BCL6B-201ENST00000293805 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 SEC14L1-227ENST00000591437 2828 ntTSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 POPDC2-204ENST00000468801 1345 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 IKBKB-202ENST00000416505 4036 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 OLFML3-202ENST00000369551 1934 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 GLYR1-202ENST00000436648 3466 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 LINC00909-202ENST00000580048 3463 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 GALC-203ENST00000393569 2547 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 KCNE1-209ENST00000621601 3148 ntAPPRIS P1 TSL 4 BASIC9.25□□□□□ -0.93
PCP4P48539 ANO5-201ENST00000324559 6651 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 AL021920.2-201ENST00000624828 1351 ntBASIC9.24□□□□□ -0.93
PCP4P48539 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC9.24□□□□□ -0.93
PCP4P48539 AC004990.1-202ENST00000454234 1965 ntTSL 2 BASIC9.24□□□□□ -0.93
PCP4P48539 PIGN-223ENST00000638369 4205 ntTSL 5 BASIC9.24□□□□□ -0.93
PCP4P48539 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
PCP4P48539 ZFP64-204ENST00000371515 3040 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 AACSP1-201ENST00000503486 2822 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 ZNF177-201ENST00000343499 1835 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 AP5M1-202ENST00000431972 1815 ntTSL 2 BASIC9.24□□□□□ -0.93
PCP4P48539 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 ZFP1-203ENST00000464850 3067 ntTSL 2 BASIC9.24□□□□□ -0.93
PCP4P48539 ELOA-203ENST00000609199 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 ATP2C1-204ENST00000428331 4795 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
PCP4P48539 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 TPM3-212ENST00000368533 3131 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC9.24□□□□□ -0.93
PCP4P48539 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
PCP4P48539 PSMB2-201ENST00000373237 2701 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 AC008764.9-201ENST00000624284 2505 ntBASIC9.24□□□□□ -0.93
PCP4P48539 LINC00654-201ENST00000379053 6113 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
PCP4P48539 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
PCP4P48539 KRT18P8-201ENST00000581937 1246 ntBASIC9.24□□□□□ -0.93
PCP4P48539 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
PCP4P48539 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC9.24□□□□□ -0.93
PCP4P48539 AC245297.3-201ENST00000611769 838 ntTSL 5 BASIC9.24□□□□□ -0.93
PCP4P48539 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 AC005786.4-201ENST00000623369 682 ntBASIC9.24□□□□□ -0.93
PCP4P48539 HLA-C-210ENST00000640219 976 ntBASIC9.24□□□□□ -0.93
PCP4P48539 NEK6-201ENST00000320246 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 AC022730.4-201ENST00000520259 2367 ntTSL 2 BASIC9.24□□□□□ -0.93
PCP4P48539 ARMC8-217ENST00000481646 3043 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 EXD2-205ENST00000409675 2828 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 FMO1-208ENST00000617670 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 DDR1-AS1-206ENST00000458361 3994 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 TSPY26P-201ENST00000476365 1326 ntBASIC9.24□□□□□ -0.93
PCP4P48539 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
PCP4P48539 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC9.24□□□□□ -0.93
PCP4P48539 DOCK2-217ENST00000540750 1753 ntTSL 5 BASIC9.24□□□□□ -0.93
PCP4P48539 ALDH1L1-AS2-202ENST00000500525 2236 ntTSL 2 BASIC9.24□□□□□ -0.93
PCP4P48539 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 RAD9B-202ENST00000392672 1846 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC9.24□□□□□ -0.93
PCP4P48539 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
PCP4P48539 MEIS2-202ENST00000338564 4829 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 MAP3K7-205ENST00000369332 4830 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 MEIS2-222ENST00000561208 4822 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 DHDDS-202ENST00000360009 3245 ntAPPRIS P4 TSL 2 BASIC9.24□□□□□ -0.93
PCP4P48539 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC9.24□□□□□ -0.93
PCP4P48539 GDA-202ENST00000358399 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 PCYOX1-204ENST00000433351 5345 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
PCP4P48539 TSPYL4-201ENST00000420283 4180 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
PCP4P48539 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
PCP4P48539 SIM1-201ENST00000262901 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 STAG3L4-202ENST00000416602 2143 ntTSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
PCP4P48539 ATP1A3-201ENST00000302102 3597 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 BCL2L13-216ENST00000616863 4761 ntTSL 4 BASIC9.23□□□□□ -0.93
PCP4P48539 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 AC104590.1-202ENST00000558368 1921 ntBASIC9.23□□□□□ -0.93
PCP4P48539 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms