Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SOX2P48431 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SOX2P48431 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SOX2P48431 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SOX2P48431 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SOX2P48431 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SOX2P48431 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SOX2P48431 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SOX2P48431 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SOX2P48431 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
SOX2P48431 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.72□□□□□ -0.37
SOX2P48431 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SOX2P48431 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SOX2P48431 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SOX2P48431 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.72□□□□□ -0.37
SOX2P48431 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SOX2P48431 PTPRVP-205ENST00000641549 5067 ntBASIC12.71□□□□□ -0.37
SOX2P48431 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.71□□□□□ -0.37
SOX2P48431 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SOX2P48431 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.71□□□□□ -0.37
SOX2P48431 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.71□□□□□ -0.37
SOX2P48431 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.71□□□□□ -0.37
SOX2P48431 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.71□□□□□ -0.37
SOX2P48431 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.71□□□□□ -0.37
SOX2P48431 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.71□□□□□ -0.37
SOX2P48431 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.71□□□□□ -0.37
SOX2P48431 POM121L8P-201ENST00000417732 1281 ntBASIC12.71□□□□□ -0.37
SOX2P48431 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.71□□□□□ -0.37
SOX2P48431 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.71□□□□□ -0.37
SOX2P48431 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.71□□□□□ -0.37
SOX2P48431 POM121L9P-203ENST00000441984 1285 ntBASIC12.71□□□□□ -0.37
SOX2P48431 ENPP7P5-201ENST00000541031 1031 ntBASIC12.71□□□□□ -0.37
SOX2P48431 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.71□□□□□ -0.37
SOX2P48431 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.71□□□□□ -0.37
SOX2P48431 TMEM261P1-201ENST00000604899 340 ntBASIC12.71□□□□□ -0.37
SOX2P48431 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.71□□□□□ -0.37
SOX2P48431 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
SOX2P48431 CU634019.7-201ENST00000624153 1185 ntBASIC12.71□□□□□ -0.37
SOX2P48431 FP236241.2-201ENST00000624906 1185 ntBASIC12.71□□□□□ -0.37
SOX2P48431 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SOX2P48431 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.71□□□□□ -0.37
SOX2P48431 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SOX2P48431 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SOX2P48431 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.71□□□□□ -0.38
SOX2P48431 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
SOX2P48431 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.71□□□□□ -0.38
SOX2P48431 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SOX2P48431 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 PCDHA6-201ENST00000378126 3267 ntBASIC12.71□□□□□ -0.38
SOX2P48431 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.71□□□□□ -0.38
SOX2P48431 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.71□□□□□ -0.38
SOX2P48431 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SOX2P48431 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.7□□□□□ -0.38
SOX2P48431 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.7□□□□□ -0.38
SOX2P48431 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.7□□□□□ -0.38
SOX2P48431 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.7□□□□□ -0.38
SOX2P48431 AC083964.2-201ENST00000623988 2396 ntBASIC12.7□□□□□ -0.38
SOX2P48431 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SOX2P48431 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SOX2P48431 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms