Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.33□□□□□ -0.44
CCL1P22362 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL1P22362 XBP1P1-201ENST00000436573 652 ntBASIC12.33□□□□□ -0.44
CCL1P22362 CTBP2P5-201ENST00000454986 1264 ntBASIC12.33□□□□□ -0.44
CCL1P22362 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL1P22362 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.33□□□□□ -0.44
CCL1P22362 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.33□□□□□ -0.44
CCL1P22362 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.33□□□□□ -0.44
CCL1P22362 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.33□□□□□ -0.44
CCL1P22362 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL1P22362 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 AC004241.5-201ENST00000623870 2448 ntBASIC12.33□□□□□ -0.44
CCL1P22362 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
CCL1P22362 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCL1P22362 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.33□□□□□ -0.44
CCL1P22362 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 MKRN5P-201ENST00000445263 1467 ntBASIC12.33□□□□□ -0.44
CCL1P22362 RPL13AP3-202ENST00000494676 1473 ntBASIC12.33□□□□□ -0.44
CCL1P22362 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.33□□□□□ -0.44
CCL1P22362 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 AL355102.3-201ENST00000554299 1678 ntBASIC12.32□□□□□ -0.44
CCL1P22362 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CCL1P22362 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CCL1P22362 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL1P22362 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 SNORA50C-201ENST00000408535 133 ntBASIC12.32□□□□□ -0.44
CCL1P22362 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CCL1P22362 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL1P22362 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL1P22362 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.32□□□□□ -0.44
CCL1P22362 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL1P22362 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.32□□□□□ -0.44
CCL1P22362 DUX4L45-201ENST00000566406 1057 ntBASIC12.32□□□□□ -0.44
CCL1P22362 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL1P22362 MIR3197-201ENST00000582241 73 ntBASIC12.32□□□□□ -0.44
CCL1P22362 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL1P22362 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.32□□□□□ -0.44
CCL1P22362 SNORA50.1-201ENST00000628590 135 ntBASIC12.32□□□□□ -0.44
CCL1P22362 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
CCL1P22362 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL1P22362 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CCL1P22362 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.32□□□□□ -0.44
CCL1P22362 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CCL1P22362 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms