| TFE3 | P19532 | MIR4525-201 | ENST00000580000 | 75 nt | BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | MIR3615-201 | ENST00000581999 | 87 nt | BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | NFIC-204 | ENST00000586919 | 1221 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AP005264.3-201 | ENST00000592370 | 485 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | KLK3-207 | ENST00000595952 | 969 nt | TSL 3 BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AC026740.1-201 | ENST00000607068 | 791 nt | BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CORO7-201 | ENST00000251166 | 3540 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | ANKMY1-204 | ENST00000391987 | 3221 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AOC1-201 | ENST00000360937 | 2649 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | POLL-206 | ENST00000370172 | 2308 nt | TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AC021683.1-201 | ENST00000585798 | 1767 nt | TSL 5 BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | RAF1-201 | ENST00000251849 | 3300 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | KCNC2-202 | ENST00000350228 | 3344 nt | APPRIS ALT2 TSL 2 BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | MAP2K4-201 | ENST00000353533 | 3826 nt | APPRIS P3 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | TFCP2-201 | ENST00000257915 | 3546 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CEP70-201 | ENST00000264982 | 2732 nt | APPRIS P3 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | LRP8-201 | ENST00000306052 | 7648 nt | APPRIS P3 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | MAPK4-201 | ENST00000400384 | 4770 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CDK20-201 | ENST00000325303 | 2175 nt | APPRIS P1 TSL 1 (best) BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AGAP10P-201 | ENST00000454844 | 2418 nt | BASIC | 15 | □□□□□ -0.01 | | |
| TFE3 | P19532 | C7orf33-201 | ENST00000307003 | 1354 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | NDC1-201 | ENST00000371429 | 5134 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AGER-201 | ENST00000375055 | 1369 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CCNG1-202 | ENST00000393929 | 2366 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | SMG9-211 | ENST00000601170 | 2387 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | SDR42E2-201 | ENST00000602312 | 2630 nt | APPRIS P1 TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | KLF4-201 | ENST00000374672 | 2813 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | GFRA1-201 | ENST00000355422 | 2583 nt | APPRIS ALT2 TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | RNF150-201 | ENST00000306799 | 4535 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | PUF60-209 | ENST00000527197 | 1559 nt | TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | ZFP36L1-201 | ENST00000336440 | 3026 nt | APPRIS P1 TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CAPN1-224 | ENST00000533129 | 2792 nt | APPRIS P1 TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | PCMTD2-207 | ENST00000609372 | 1321 nt | TSL 4 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | ARRB2-204 | ENST00000412477 | 1779 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AL022326.1-201 | ENST00000434516 | 1778 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | LACTB2-201 | ENST00000276590 | 1508 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CNOT9-201 | ENST00000273064 | 4079 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | PRDX5-203 | ENST00000352435 | 596 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | NRM-202 | ENST00000376420 | 1228 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CTNNBIP1-202 | ENST00000377258 | 852 nt | APPRIS P1 TSL 3 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | SLC16A6P1-201 | ENST00000413214 | 1059 nt | BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AL139420.1-201 | ENST00000439394 | 653 nt | TSL 3 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | HVCN1-203 | ENST00000439744 | 1215 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | PRSS30P-202 | ENST00000475030 | 752 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AC091804.1-201 | ENST00000486888 | 567 nt | BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AC125604.1-201 | ENST00000496255 | 707 nt | BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | HIST2H2BC-201 | ENST00000498492 | 580 nt | BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | PRSS30P-205 | ENST00000506153 | 699 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | SEC23A-204 | ENST00000548032 | 907 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CD63-208 | ENST00000549117 | 1233 nt | APPRIS P1 TSL 3 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CDIP1-202 | ENST00000562334 | 1205 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | ARL16-210 | ENST00000574938 | 751 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | SNRPD2-206 | ENST00000588301 | 702 nt | APPRIS P1 TSL 3 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | FAM236A-201 | ENST00000593662 | 453 nt | APPRIS ALT2 TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | FAM236B-201 | ENST00000596535 | 465 nt | APPRIS P1 TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AL136295.7-201 | ENST00000619226 | 1200 nt | BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | MPPED2-202 | ENST00000448418 | 5591 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | FGFR1-202 | ENST00000335922 | 4157 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | PDE8A-203 | ENST00000394553 | 3912 nt | APPRIS P4 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | LINC00963-203 | ENST00000423918 | 1654 nt | TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | MED15-204 | ENST00000406969 | 3210 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | SIRT5-203 | ENST00000379262 | 2339 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | NMNAT3-202 | ENST00000339837 | 1863 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | PAX2-202 | ENST00000361791 | 3193 nt | APPRIS ALT1 TSL 2 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CNPY1-203 | ENST00000636372 | 2259 nt | APPRIS ALT2 TSL 5 BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | RARS2-201 | ENST00000369536 | 1818 nt | APPRIS P1 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | FAM124B-201 | ENST00000243806 | 2030 nt | TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | SERPING1-201 | ENST00000278407 | 2002 nt | APPRIS P2 TSL 1 (best) BASIC | 14.99 | □□□□□ -0.01 | | |
| TFE3 | P19532 | FOXO4-201 | ENST00000341558 | 1353 nt | TSL 5 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CERS6-202 | ENST00000392687 | 6851 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | ST7L-202 | ENST00000358039 | 4528 nt | TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | KRT8P24-201 | ENST00000560290 | 1559 nt | BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | GDF9-201 | ENST00000296875 | 1796 nt | TSL 5 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | POU2F2-204 | ENST00000526816 | 3218 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AC011462.1-202 | ENST00000540732 | 1960 nt | APPRIS P1 TSL 2 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | SLC25A35-201 | ENST00000380067 | 2785 nt | TSL 2 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CIART-201 | ENST00000290363 | 1746 nt | APPRIS P3 TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | LAT2-205 | ENST00000460943 | 2527 nt | APPRIS P2 TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | NCKIPSD-204 | ENST00000416649 | 2925 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | GAK-214 | ENST00000511163 | 4280 nt | TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | PDE8B-205 | ENST00000346042 | 3276 nt | TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | PODN-207 | ENST00000618387 | 3065 nt | APPRIS ALT2 TSL 2 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | GRM1-201 | ENST00000282753 | 6622 nt | APPRIS P3 TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | EFHC1-230 | ENST00000637263 | 2089 nt | TSL 5 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | ADAT1-201 | ENST00000307921 | 1869 nt | APPRIS P1 TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | LIMS2-209 | ENST00000410038 | 1695 nt | TSL 2 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | ACTG1P17-202 | ENST00000560958 | 1662 nt | TSL 2 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | MAPK12-203 | ENST00000395780 | 1459 nt | TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | ZNF138-201 | ENST00000307355 | 1141 nt | APPRIS ALT2 TSL 4 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | MRPS12-201 | ENST00000308018 | 1207 nt | APPRIS P1 TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | ALKBH2-201 | ENST00000343075 | 1030 nt | APPRIS P1 TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | IGHV3-13-201 | ENST00000390602 | 430 nt | APPRIS P1 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CD300A-204 | ENST00000392625 | 1163 nt | TSL 1 (best) BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | HNRNPA1P41-201 | ENST00000397777 | 928 nt | BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | FNTAP2-201 | ENST00000430308 | 634 nt | BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | CSTF3-202 | ENST00000431742 | 715 nt | TSL 2 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | EIF4HP1-201 | ENST00000453115 | 687 nt | BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | PGAP2-214 | ENST00000465307 | 1100 nt | TSL 2 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AC008406.1-201 | ENST00000509530 | 541 nt | TSL 3 BASIC | 14.98 | □□□□□ -0.01 | | |
| TFE3 | P19532 | AC097103.2-206 | ENST00000514729 | 588 nt | TSL 4 BASIC | 14.98 | □□□□□ -0.01 | | |