Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NCLP19338 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.25■□□□□ 0.35
NCLP19338 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.25■□□□□ 0.35
NCLP19338 RN7SL399P-201ENST00000471648 279 ntBASIC17.25■□□□□ 0.35
NCLP19338 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.25■□□□□ 0.35
NCLP19338 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.25■□□□□ 0.35
NCLP19338 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.25■□□□□ 0.35
NCLP19338 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.25■□□□□ 0.35
NCLP19338 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NCLP19338 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
NCLP19338 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
NCLP19338 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.25■□□□□ 0.35
NCLP19338 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 AC132938.2-201ENST00000579188 680 ntBASIC17.25■□□□□ 0.35
NCLP19338 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.25■□□□□ 0.35
NCLP19338 MIR8072-201ENST00000614241 80 ntBASIC17.25■□□□□ 0.35
NCLP19338 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NCLP19338 AL591163.1-201ENST00000641757 987 ntBASIC17.25■□□□□ 0.35
NCLP19338 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NCLP19338 AC015818.8-201ENST00000587907 1519 ntBASIC17.25■□□□□ 0.35
NCLP19338 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.25■□□□□ 0.35
NCLP19338 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.25■□□□□ 0.35
NCLP19338 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.25■□□□□ 0.35
NCLP19338 AC145098.2-201ENST00000623593 3026 ntBASIC17.25■□□□□ 0.35
NCLP19338 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 SALL4P5-201ENST00000419001 1760 ntBASIC17.25■□□□□ 0.35
NCLP19338 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCLP19338 AC020658.7-201ENST00000624274 2442 ntBASIC17.25■□□□□ 0.35
NCLP19338 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NCLP19338 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NCLP19338 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NCLP19338 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NCLP19338 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.24■□□□□ 0.35
NCLP19338 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NCLP19338 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NCLP19338 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
NCLP19338 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 NUS1P3-201ENST00000423502 862 ntBASIC17.24■□□□□ 0.35
NCLP19338 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.24■□□□□ 0.35
NCLP19338 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.24■□□□□ 0.35
NCLP19338 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.24■□□□□ 0.35
NCLP19338 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.24■□□□□ 0.35
NCLP19338 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.24■□□□□ 0.35
NCLP19338 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.24■□□□□ 0.35
NCLP19338 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.24■□□□□ 0.35
NCLP19338 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.24■□□□□ 0.35
NCLP19338 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NCLP19338 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC17.24■□□□□ 0.35
NCLP19338 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NCLP19338 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
NCLP19338 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NCLP19338 AL136172.1-201ENST00000598590 1394 ntBASIC17.24■□□□□ 0.35
NCLP19338 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCLP19338 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.24■□□□□ 0.35
NCLP19338 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NCLP19338 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC17.24■□□□□ 0.35
NCLP19338 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NCLP19338 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.23■□□□□ 0.35
NCLP19338 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 AL139094.1-201ENST00000405549 1188 ntBASIC17.23■□□□□ 0.35
NCLP19338 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.23■□□□□ 0.35
NCLP19338 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms