Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.54□□□□□ -0.08
VCLP18206 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.54□□□□□ -0.08
VCLP18206 AC100827.2-201ENST00000563214 1194 ntBASIC14.54□□□□□ -0.08
VCLP18206 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.54□□□□□ -0.08
VCLP18206 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.54□□□□□ -0.08
VCLP18206 AL022328.3-201ENST00000607943 679 ntBASIC14.54□□□□□ -0.08
VCLP18206 AL023803.2-201ENST00000620080 638 ntBASIC14.54□□□□□ -0.08
VCLP18206 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VCLP18206 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VCLP18206 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
VCLP18206 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VCLP18206 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.54□□□□□ -0.08
VCLP18206 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.54□□□□□ -0.08
VCLP18206 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VCLP18206 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VCLP18206 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VCLP18206 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.54□□□□□ -0.08
VCLP18206 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
VCLP18206 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VCLP18206 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VCLP18206 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
VCLP18206 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VCLP18206 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VCLP18206 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VCLP18206 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.53□□□□□ -0.08
VCLP18206 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.53□□□□□ -0.08
VCLP18206 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.53□□□□□ -0.08
VCLP18206 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.53□□□□□ -0.08
VCLP18206 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
VCLP18206 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VCLP18206 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.53□□□□□ -0.08
VCLP18206 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.53□□□□□ -0.08
VCLP18206 MIR663B-201ENST00000408361 115 ntBASIC14.53□□□□□ -0.08
VCLP18206 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.53□□□□□ -0.08
VCLP18206 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.53□□□□□ -0.08
VCLP18206 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.53□□□□□ -0.08
VCLP18206 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.53□□□□□ -0.08
VCLP18206 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.53□□□□□ -0.08
VCLP18206 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.53□□□□□ -0.08
VCLP18206 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
VCLP18206 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.53□□□□□ -0.08
VCLP18206 DUX4L46-201ENST00000566845 751 ntBASIC14.53□□□□□ -0.08
VCLP18206 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.53□□□□□ -0.08
VCLP18206 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.53□□□□□ -0.08
VCLP18206 AC005695.3-201ENST00000614522 232 ntBASIC14.53□□□□□ -0.08
VCLP18206 AL096828.3-201ENST00000615354 462 ntBASIC14.53□□□□□ -0.08
VCLP18206 AC027601.3-201ENST00000622907 509 ntBASIC14.53□□□□□ -0.08
VCLP18206 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.53□□□□□ -0.08
VCLP18206 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.53□□□□□ -0.08
VCLP18206 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.53□□□□□ -0.08
VCLP18206 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VCLP18206 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
VCLP18206 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
VCLP18206 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
VCLP18206 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
VCLP18206 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.53□□□□□ -0.08
VCLP18206 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
VCLP18206 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VCLP18206 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.52□□□□□ -0.08
VCLP18206 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
VCLP18206 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
VCLP18206 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
VCLP18206 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
VCLP18206 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms