Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
CFTRP13569 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CFTRP13569 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CFTRP13569 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CFTRP13569 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC23.56■■□□□ 1.36
CFTRP13569 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC23.56■■□□□ 1.36
CFTRP13569 AC008021.1-201ENST00000474180 414 ntBASIC23.56■■□□□ 1.36
CFTRP13569 RN7SL47P-201ENST00000488710 299 ntBASIC23.56■■□□□ 1.36
CFTRP13569 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC23.56■■□□□ 1.36
CFTRP13569 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CFTRP13569 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC23.56■■□□□ 1.36
CFTRP13569 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC23.56■■□□□ 1.36
CFTRP13569 FMO6P-201ENST00000236166 1620 ntBASIC23.55■■□□□ 1.36
CFTRP13569 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CFTRP13569 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CFTRP13569 AC073347.1-201ENST00000421633 2643 ntBASIC23.55■■□□□ 1.36
CFTRP13569 BX640514.1-201ENST00000583223 1918 ntBASIC23.55■■□□□ 1.36
CFTRP13569 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CFTRP13569 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CFTRP13569 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CFTRP13569 AC023824.1-201ENST00000562945 2975 ntBASIC23.55■■□□□ 1.36
CFTRP13569 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CFTRP13569 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CFTRP13569 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CFTRP13569 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC23.55■■□□□ 1.36
CFTRP13569 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CFTRP13569 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CFTRP13569 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CFTRP13569 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC23.55■■□□□ 1.36
CFTRP13569 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
CFTRP13569 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC23.55■■□□□ 1.36
CFTRP13569 AC009812.1-201ENST00000605948 1059 ntBASIC23.55■■□□□ 1.36
CFTRP13569 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC23.55■■□□□ 1.36
CFTRP13569 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
CFTRP13569 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CFTRP13569 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC23.55■■□□□ 1.36
CFTRP13569 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CFTRP13569 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC23.54■■□□□ 1.36
CFTRP13569 HSPA7-201ENST00000445535 1927 ntBASIC23.54■■□□□ 1.36
CFTRP13569 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC23.54■■□□□ 1.36
CFTRP13569 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CFTRP13569 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC23.54■■□□□ 1.36
CFTRP13569 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CFTRP13569 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CFTRP13569 AL513497.1-201ENST00000624273 2083 ntBASIC23.54■■□□□ 1.36
CFTRP13569 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CFTRP13569 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC23.54■■□□□ 1.36
CFTRP13569 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CFTRP13569 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CFTRP13569 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC23.54■■□□□ 1.36
CFTRP13569 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC23.54■■□□□ 1.36
CFTRP13569 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CFTRP13569 AC104115.1-201ENST00000484005 623 ntBASIC23.54■■□□□ 1.36
CFTRP13569 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CFTRP13569 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CFTRP13569 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC23.54■■□□□ 1.36
CFTRP13569 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC23.54■■□□□ 1.36
CFTRP13569 RN7SL202P-201ENST00000584410 262 ntBASIC23.54■■□□□ 1.36
CFTRP13569 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC23.54■■□□□ 1.36
CFTRP13569 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CFTRP13569 RCC2P5-201ENST00000492126 1487 ntBASIC23.54■■□□□ 1.36
CFTRP13569 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CFTRP13569 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
CFTRP13569 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC23.53■■□□□ 1.36
CFTRP13569 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CFTRP13569 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC23.53■■□□□ 1.36
CFTRP13569 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CFTRP13569 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CFTRP13569 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFTRP13569 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CFTRP13569 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFTRP13569 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFTRP13569 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CFTRP13569 SNORA50D-201ENST00000408059 134 ntBASIC23.53■■□□□ 1.36
CFTRP13569 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFTRP13569 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC23.53■■□□□ 1.36
CFTRP13569 RN7SL646P-201ENST00000492969 297 ntBASIC23.53■■□□□ 1.36
CFTRP13569 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC23.53■■□□□ 1.36
CFTRP13569 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC23.53■■□□□ 1.36
CFTRP13569 NAA38-204ENST00000575208 529 ntTSL 3 BASIC23.53■■□□□ 1.36
CFTRP13569 AC136475.7-201ENST00000602949 592 ntBASIC23.53■■□□□ 1.36
CFTRP13569 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFTRP13569 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CFTRP13569 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CFTRP13569 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC23.53■■□□□ 1.36
CFTRP13569 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CFTRP13569 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFTRP13569 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CFTRP13569 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CFTRP13569 AF013593.1-201ENST00000458074 1487 ntBASIC23.52■■□□□ 1.36
CFTRP13569 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CFTRP13569 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CFTRP13569 PMF1-201ENST00000368273 884 ntTSL 2 BASIC23.52■■□□□ 1.36
CFTRP13569 CFL1P6-201ENST00000400899 494 ntBASIC23.52■■□□□ 1.36
CFTRP13569 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC23.52■■□□□ 1.36
CFTRP13569 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
CFTRP13569 IQCF4-203ENST00000428561 420 ntBASIC23.52■■□□□ 1.36
CFTRP13569 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC23.52■■□□□ 1.36
CFTRP13569 ACTG1P23-201ENST00000437653 1074 ntBASIC23.52■■□□□ 1.36
CFTRP13569 HNRNPA1P3-201ENST00000440968 551 ntBASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms