Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLTAP09496 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.76■□□□□ 0.11
CLTAP09496 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.76■□□□□ 0.11
CLTAP09496 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
CLTAP09496 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.76■□□□□ 0.11
CLTAP09496 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CLTAP09496 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.76■□□□□ 0.11
CLTAP09496 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLTAP09496 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.76■□□□□ 0.11
CLTAP09496 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLTAP09496 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.76■□□□□ 0.11
CLTAP09496 COL6A4P2-202ENST00000504443 2753 ntBASIC15.75■□□□□ 0.11
CLTAP09496 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.75■□□□□ 0.11
CLTAP09496 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.75■□□□□ 0.11
CLTAP09496 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CLTAP09496 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
CLTAP09496 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLTAP09496 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLTAP09496 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.75■□□□□ 0.11
CLTAP09496 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.75■□□□□ 0.11
CLTAP09496 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.75■□□□□ 0.11
CLTAP09496 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CLTAP09496 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLTAP09496 AC104506.1-201ENST00000609247 429 ntBASIC15.75■□□□□ 0.11
CLTAP09496 KRT8P21-201ENST00000430398 1491 ntBASIC15.75■□□□□ 0.11
CLTAP09496 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.75■□□□□ 0.11
CLTAP09496 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.75■□□□□ 0.11
CLTAP09496 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLTAP09496 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CLTAP09496 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.75■□□□□ 0.11
CLTAP09496 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.75■□□□□ 0.11
CLTAP09496 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.75■□□□□ 0.11
CLTAP09496 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLTAP09496 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.75■□□□□ 0.11
CLTAP09496 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLTAP09496 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLTAP09496 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLTAP09496 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLTAP09496 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.74■□□□□ 0.11
CLTAP09496 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLTAP09496 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLTAP09496 AL928921.2-201ENST00000641325 2442 ntBASIC15.74■□□□□ 0.11
CLTAP09496 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLTAP09496 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLTAP09496 AC011498.7-201ENST00000624986 2027 ntBASIC15.74■□□□□ 0.11
CLTAP09496 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.74■□□□□ 0.11
CLTAP09496 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLTAP09496 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.74■□□□□ 0.11
CLTAP09496 ACTG1P2-201ENST00000415776 1125 ntBASIC15.74■□□□□ 0.11
CLTAP09496 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.74■□□□□ 0.11
CLTAP09496 ACTG1P11-201ENST00000425411 1125 ntBASIC15.74■□□□□ 0.11
CLTAP09496 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.74■□□□□ 0.11
CLTAP09496 RN7SL11P-201ENST00000471305 293 ntBASIC15.74■□□□□ 0.11
CLTAP09496 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.74■□□□□ 0.11
CLTAP09496 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLTAP09496 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.74■□□□□ 0.11
CLTAP09496 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CLTAP09496 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.74■□□□□ 0.11
CLTAP09496 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.74■□□□□ 0.11
CLTAP09496 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.74■□□□□ 0.11
CLTAP09496 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.74■□□□□ 0.11
CLTAP09496 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.74■□□□□ 0.11
CLTAP09496 AC021016.3-201ENST00000608367 477 ntBASIC15.74■□□□□ 0.11
CLTAP09496 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.74■□□□□ 0.11
CLTAP09496 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.74■□□□□ 0.11
CLTAP09496 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.74■□□□□ 0.11
CLTAP09496 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLTAP09496 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLTAP09496 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLTAP09496 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLTAP09496 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLTAP09496 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.74■□□□□ 0.11
CLTAP09496 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms