Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC13.27□□□□□ -0.29
THBS1P07996 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.27□□□□□ -0.29
THBS1P07996 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.27□□□□□ -0.29
THBS1P07996 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 AC007688.1-201ENST00000475592 759 ntBASIC13.27□□□□□ -0.29
THBS1P07996 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.27□□□□□ -0.29
THBS1P07996 AC022217.1-201ENST00000521069 738 ntBASIC13.27□□□□□ -0.29
THBS1P07996 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.27□□□□□ -0.29
THBS1P07996 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 AL512310.5-201ENST00000551999 515 ntBASIC13.27□□□□□ -0.29
THBS1P07996 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS1P07996 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.27□□□□□ -0.29
THBS1P07996 EEF1DP1-201ENST00000585891 896 ntBASIC13.27□□□□□ -0.29
THBS1P07996 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.27□□□□□ -0.29
THBS1P07996 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS1P07996 AL591471.1-201ENST00000621855 229 ntBASIC13.27□□□□□ -0.29
THBS1P07996 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.27□□□□□ -0.29
THBS1P07996 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.27□□□□□ -0.29
THBS1P07996 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS1P07996 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.27□□□□□ -0.29
THBS1P07996 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS1P07996 AC073548.1-201ENST00000624088 1882 ntBASIC13.27□□□□□ -0.29
THBS1P07996 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS1P07996 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.26□□□□□ -0.29
THBS1P07996 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.26□□□□□ -0.29
THBS1P07996 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
THBS1P07996 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
THBS1P07996 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
THBS1P07996 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.26□□□□□ -0.29
THBS1P07996 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.26□□□□□ -0.29
THBS1P07996 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
THBS1P07996 KATNBL1P2-201ENST00000433311 835 ntBASIC13.26□□□□□ -0.29
THBS1P07996 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.26□□□□□ -0.29
THBS1P07996 KLF2P1-201ENST00000447438 1042 ntBASIC13.26□□□□□ -0.29
THBS1P07996 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.26□□□□□ -0.29
THBS1P07996 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.26□□□□□ -0.29
THBS1P07996 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.26□□□□□ -0.29
THBS1P07996 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.26□□□□□ -0.29
THBS1P07996 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.26□□□□□ -0.29
THBS1P07996 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.26□□□□□ -0.29
THBS1P07996 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.26□□□□□ -0.29
THBS1P07996 AC003686.1-201ENST00000550956 1034 ntBASIC13.26□□□□□ -0.29
THBS1P07996 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.26□□□□□ -0.29
THBS1P07996 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.26□□□□□ -0.29
THBS1P07996 DUX4L45-201ENST00000566406 1057 ntBASIC13.26□□□□□ -0.29
THBS1P07996 AC072061.1-201ENST00000569710 2234 ntBASIC13.26□□□□□ -0.29
THBS1P07996 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.26□□□□□ -0.29
THBS1P07996 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.26□□□□□ -0.29
THBS1P07996 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.26□□□□□ -0.29
THBS1P07996 AC133540.1-201ENST00000620845 1019 ntBASIC13.26□□□□□ -0.29
THBS1P07996 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
THBS1P07996 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
THBS1P07996 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
THBS1P07996 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
THBS1P07996 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
THBS1P07996 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS1P07996 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
THBS1P07996 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
THBS1P07996 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms