Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SFTPBP07988 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 BOLA2P3-201ENST00000404566 256 ntBASIC12.61□□□□□ -0.39
SFTPBP07988 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SFTPBP07988 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.61□□□□□ -0.39
SFTPBP07988 KRT223P-202ENST00000449164 1292 ntBASIC12.61□□□□□ -0.39
SFTPBP07988 CTBP2P5-201ENST00000454986 1264 ntBASIC12.61□□□□□ -0.39
SFTPBP07988 AC119751.2-201ENST00000504529 210 ntBASIC12.61□□□□□ -0.39
SFTPBP07988 AC104989.1-201ENST00000519711 778 ntBASIC12.61□□□□□ -0.39
SFTPBP07988 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.61□□□□□ -0.39
SFTPBP07988 AC133552.6-201ENST00000613406 534 ntBASIC12.61□□□□□ -0.39
SFTPBP07988 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.61□□□□□ -0.39
SFTPBP07988 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SFTPBP07988 AC015688.4-201ENST00000580780 1647 ntBASIC12.61□□□□□ -0.39
SFTPBP07988 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.61□□□□□ -0.39
SFTPBP07988 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SFTPBP07988 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SFTPBP07988 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.61□□□□□ -0.39
SFTPBP07988 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 AC130686.1-201ENST00000622936 2466 ntBASIC12.61□□□□□ -0.39
SFTPBP07988 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.6□□□□□ -0.39
SFTPBP07988 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SFTPBP07988 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 CICP16-201ENST00000502609 2813 ntBASIC12.6□□□□□ -0.39
SFTPBP07988 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 AC020910.5-201ENST00000623668 1865 ntBASIC12.6□□□□□ -0.39
SFTPBP07988 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 AC092933.1-201ENST00000393644 945 ntBASIC12.6□□□□□ -0.39
SFTPBP07988 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
SFTPBP07988 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.6□□□□□ -0.39
SFTPBP07988 KLF2P4-201ENST00000451959 1225 ntBASIC12.6□□□□□ -0.39
SFTPBP07988 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 FTH1P14-201ENST00000482930 551 ntBASIC12.6□□□□□ -0.39
SFTPBP07988 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.6□□□□□ -0.39
SFTPBP07988 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.6□□□□□ -0.39
SFTPBP07988 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SFTPBP07988 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.6□□□□□ -0.39
SFTPBP07988 COX11-210ENST00000639671 696 ntBASIC12.6□□□□□ -0.39
SFTPBP07988 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
SFTPBP07988 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.6□□□□□ -0.39
SFTPBP07988 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SFTPBP07988 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms