Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TPM3P06753 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TPM3P06753 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TPM3P06753 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM3P06753 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM3P06753 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC16.18■□□□□ 0.18
TPM3P06753 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TPM3P06753 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TPM3P06753 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.18■□□□□ 0.18
TPM3P06753 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
TPM3P06753 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.18■□□□□ 0.18
TPM3P06753 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM3P06753 SOCS2P1-201ENST00000417727 557 ntBASIC16.18■□□□□ 0.18
TPM3P06753 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.18■□□□□ 0.18
TPM3P06753 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM3P06753 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.18■□□□□ 0.18
TPM3P06753 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.18■□□□□ 0.18
TPM3P06753 DOC2GP-202ENST00000514950 1163 ntBASIC16.18■□□□□ 0.18
TPM3P06753 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.18■□□□□ 0.18
TPM3P06753 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.18■□□□□ 0.18
TPM3P06753 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TPM3P06753 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM3P06753 AC104794.3-201ENST00000566840 1248 ntBASIC16.18■□□□□ 0.18
TPM3P06753 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
TPM3P06753 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.18■□□□□ 0.18
TPM3P06753 BAP1-211ENST00000615113 489 ntBASIC16.18■□□□□ 0.18
TPM3P06753 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TPM3P06753 AC079781.4-201ENST00000641908 219 ntBASIC16.18■□□□□ 0.18
TPM3P06753 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM3P06753 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM3P06753 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TPM3P06753 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.18■□□□□ 0.18
TPM3P06753 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TPM3P06753 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC16.18■□□□□ 0.18
TPM3P06753 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TPM3P06753 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TPM3P06753 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 AC022144.1-201ENST00000602255 1580 ntBASIC16.17■□□□□ 0.18
TPM3P06753 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TPM3P06753 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM3P06753 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TPM3P06753 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.17■□□□□ 0.18
TPM3P06753 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM3P06753 ACTBP8-201ENST00000403258 1108 ntBASIC16.17■□□□□ 0.18
TPM3P06753 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.17■□□□□ 0.18
TPM3P06753 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.17■□□□□ 0.18
TPM3P06753 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM3P06753 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
TPM3P06753 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 KRT18P25-201ENST00000508931 1278 ntBASIC16.17■□□□□ 0.18
TPM3P06753 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.17■□□□□ 0.18
TPM3P06753 AC008738.7-201ENST00000609744 511 ntBASIC16.17■□□□□ 0.18
TPM3P06753 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TPM3P06753 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.17■□□□□ 0.18
TPM3P06753 AC004840.1-201ENST00000636359 365 ntBASIC16.17■□□□□ 0.18
TPM3P06753 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TPM3P06753 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.17■□□□□ 0.18
TPM3P06753 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TPM3P06753 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.17■□□□□ 0.18
TPM3P06753 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TPM3P06753 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.16■□□□□ 0.18
TPM3P06753 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC16.16■□□□□ 0.18
TPM3P06753 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.16■□□□□ 0.18
TPM3P06753 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TPM3P06753 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC16.16■□□□□ 0.18
TPM3P06753 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms