Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPNS1P04632 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPNS1P04632 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPNS1P04632 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPNS1P04632 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPNS1P04632 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPNS1P04632 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CAPNS1P04632 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPNS1P04632 NSD1-211ENST00000511258 809 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPNS1P04632 ALG1L13P-202ENST00000519320 584 ntBASIC14.33□□□□□ -0.12
CAPNS1P04632 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPNS1P04632 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPNS1P04632 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPNS1P04632 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPNS1P04632 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CAPNS1P04632 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.33□□□□□ -0.12
CAPNS1P04632 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPNS1P04632 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPNS1P04632 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPNS1P04632 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CAPNS1P04632 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPNS1P04632 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPNS1P04632 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPNS1P04632 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 AL136295.7-201ENST00000619226 1200 ntBASIC14.33□□□□□ -0.12
CAPNS1P04632 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CAPNS1P04632 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CAPNS1P04632 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CAPNS1P04632 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPNS1P04632 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPNS1P04632 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPNS1P04632 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPNS1P04632 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CAPNS1P04632 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPNS1P04632 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.32□□□□□ -0.12
CAPNS1P04632 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 MYO15B-237ENST00000642007 4893 ntBASIC14.32□□□□□ -0.12
CAPNS1P04632 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CAPNS1P04632 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.32□□□□□ -0.12
CAPNS1P04632 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.32□□□□□ -0.12
CAPNS1P04632 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC14.32□□□□□ -0.12
CAPNS1P04632 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.32□□□□□ -0.12
CAPNS1P04632 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.32□□□□□ -0.12
CAPNS1P04632 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.32□□□□□ -0.12
CAPNS1P04632 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPNS1P04632 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPNS1P04632 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.32□□□□□ -0.12
CAPNS1P04632 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPNS1P04632 FO393412.1-201ENST00000619841 382 ntBASIC14.32□□□□□ -0.12
CAPNS1P04632 MIR6858-201ENST00000620733 67 ntBASIC14.32□□□□□ -0.12
CAPNS1P04632 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CAPNS1P04632 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CAPNS1P04632 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CAPNS1P04632 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.32□□□□□ -0.12
CAPNS1P04632 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CAPNS1P04632 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CAPNS1P04632 KRT8P14-201ENST00000414254 1442 ntBASIC14.32□□□□□ -0.12
CAPNS1P04632 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CAPNS1P04632 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.32□□□□□ -0.12
CAPNS1P04632 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CAPNS1P04632 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CAPNS1P04632 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CAPNS1P04632 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms