Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.37□□□□□ -0.59
TRGV3P03979 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV3P03979 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV3P03979 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
TRGV3P03979 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV3P03979 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TRGV3P03979 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV3P03979 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC11.37□□□□□ -0.59
TRGV3P03979 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.37□□□□□ -0.59
TRGV3P03979 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV3P03979 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV3P03979 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV3P03979 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV3P03979 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.37□□□□□ -0.59
TRGV3P03979 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV3P03979 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TRGV3P03979 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TRGV3P03979 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TRGV3P03979 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 GRN-222ENST00000639447 1314 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 AC079781.5-202ENST00000641784 3743 ntBASIC11.36□□□□□ -0.59
TRGV3P03979 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV3P03979 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV3P03979 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV3P03979 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV3P03979 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC11.36□□□□□ -0.59
TRGV3P03979 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV3P03979 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 RPL18P13-201ENST00000478088 569 ntBASIC11.36□□□□□ -0.59
TRGV3P03979 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 AC092658.1-201ENST00000505836 891 ntBASIC11.36□□□□□ -0.59
TRGV3P03979 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV3P03979 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC11.36□□□□□ -0.59
TRGV3P03979 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC11.36□□□□□ -0.59
TRGV3P03979 RN7SL163P-201ENST00000583100 276 ntBASIC11.36□□□□□ -0.59
TRGV3P03979 AC133540.1-201ENST00000620845 1019 ntBASIC11.36□□□□□ -0.59
TRGV3P03979 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 AL008638.5-201ENST00000623814 1298 ntBASIC11.36□□□□□ -0.59
TRGV3P03979 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
TRGV3P03979 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
TRGV3P03979 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
TRGV3P03979 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV3P03979 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV3P03979 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 AC144522.1-201ENST00000625111 1658 ntBASIC11.36□□□□□ -0.59
TRGV3P03979 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.36□□□□□ -0.59
TRGV3P03979 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.36□□□□□ -0.59
TRGV3P03979 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TRGV3P03979 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
TRGV3P03979 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.35□□□□□ -0.59
TRGV3P03979 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV3P03979 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV3P03979 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.35□□□□□ -0.59
TRGV3P03979 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV3P03979 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV3P03979 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV3P03979 AC004899.1-201ENST00000424687 1714 ntBASIC11.35□□□□□ -0.59
TRGV3P03979 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV3P03979 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
TRGV3P03979 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms