Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.63□□□□□ -0.23
MT-ND1P03886 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.63□□□□□ -0.23
MT-ND1P03886 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.63□□□□□ -0.23
MT-ND1P03886 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.63□□□□□ -0.23
MT-ND1P03886 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.63□□□□□ -0.23
MT-ND1P03886 UGT1A2P-201ENST00000454886 866 ntBASIC13.63□□□□□ -0.23
MT-ND1P03886 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.63□□□□□ -0.23
MT-ND1P03886 GIMAP3P-201ENST00000495150 836 ntBASIC13.63□□□□□ -0.23
MT-ND1P03886 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
MT-ND1P03886 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.63□□□□□ -0.23
MT-ND1P03886 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.63□□□□□ -0.23
MT-ND1P03886 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.63□□□□□ -0.23
MT-ND1P03886 AC133539.2-201ENST00000604757 467 ntBASIC13.63□□□□□ -0.23
MT-ND1P03886 TMEM261P1-201ENST00000604899 340 ntBASIC13.63□□□□□ -0.23
MT-ND1P03886 AP005019.2-201ENST00000615104 511 ntBASIC13.63□□□□□ -0.23
MT-ND1P03886 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.63□□□□□ -0.23
MT-ND1P03886 AP001002.3-201ENST00000623482 206 ntBASIC13.63□□□□□ -0.23
MT-ND1P03886 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
MT-ND1P03886 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
MT-ND1P03886 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
MT-ND1P03886 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.63□□□□□ -0.23
MT-ND1P03886 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
MT-ND1P03886 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
MT-ND1P03886 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.63□□□□□ -0.23
MT-ND1P03886 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
MT-ND1P03886 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.63□□□□□ -0.23
MT-ND1P03886 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MT-ND1P03886 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.62□□□□□ -0.23
MT-ND1P03886 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
MT-ND1P03886 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.62□□□□□ -0.23
MT-ND1P03886 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MT-ND1P03886 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.62□□□□□ -0.23
MT-ND1P03886 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
MT-ND1P03886 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
MT-ND1P03886 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
MT-ND1P03886 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.62□□□□□ -0.23
MT-ND1P03886 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
MT-ND1P03886 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 AL031719.1-201ENST00000623365 2587 ntBASIC13.62□□□□□ -0.23
MT-ND1P03886 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.62□□□□□ -0.23
MT-ND1P03886 AC087499.6-201ENST00000411576 835 ntBASIC13.62□□□□□ -0.23
MT-ND1P03886 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.62□□□□□ -0.23
MT-ND1P03886 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.62□□□□□ -0.23
MT-ND1P03886 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.62□□□□□ -0.23
MT-ND1P03886 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.62□□□□□ -0.23
MT-ND1P03886 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
MT-ND1P03886 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.62□□□□□ -0.23
MT-ND1P03886 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
MT-ND1P03886 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
MT-ND1P03886 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.62□□□□□ -0.23
MT-ND1P03886 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.62□□□□□ -0.23
MT-ND1P03886 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
MT-ND1P03886 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MT-ND1P03886 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MT-ND1P03886 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
MT-ND1P03886 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.61□□□□□ -0.23
MT-ND1P03886 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
MT-ND1P03886 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
MT-ND1P03886 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.61□□□□□ -0.23
MT-ND1P03886 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.61□□□□□ -0.23
MT-ND1P03886 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.61□□□□□ -0.23
MT-ND1P03886 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MT-ND1P03886 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms