Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC16.05■□□□□ 0.16
TRIM17Q9Y577 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 AC026691.1-201ENST00000602502 2017 ntBASIC16.04■□□□□ 0.16
TRIM17Q9Y577 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 AC073210.1-201ENST00000414799 232 ntBASIC16.04■□□□□ 0.16
TRIM17Q9Y577 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 SLC25A15P3-201ENST00000505530 290 ntBASIC16.04■□□□□ 0.16
TRIM17Q9Y577 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 LY6E-215ENST00000523847 427 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 ACTBP9-201ENST00000587663 1099 ntBASIC16.04■□□□□ 0.16
TRIM17Q9Y577 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 AC005746.3-201ENST00000614751 393 ntBASIC16.04■□□□□ 0.16
TRIM17Q9Y577 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM17Q9Y577 AP005117.1-202ENST00000581724 1908 ntBASIC16.04■□□□□ 0.16
TRIM17Q9Y577 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 MIR339-201ENST00000362153 94 ntBASIC16.03■□□□□ 0.16
TRIM17Q9Y577 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 OR2W2P-201ENST00000406313 909 ntBASIC16.03■□□□□ 0.16
TRIM17Q9Y577 RPL3P2-204ENST00000413027 1203 ntBASIC16.03■□□□□ 0.16
TRIM17Q9Y577 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 MYL6-215ENST00000549566 685 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 RN7SL440P-201ENST00000577855 343 ntBASIC16.03■□□□□ 0.16
TRIM17Q9Y577 AC026336.4-201ENST00000624565 1050 ntBASIC16.03■□□□□ 0.16
TRIM17Q9Y577 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM17Q9Y577 AC117503.4-201ENST00000623229 1418 ntBASIC16.02■□□□□ 0.16
TRIM17Q9Y577 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRIM17Q9Y577 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms