Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 AC005696.4-201ENST00000614400 3147 ntBASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 DBIL5P-203ENST00000536214 2677 ntBASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NKX1-2Q9UD57 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
NKX1-2Q9UD57 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
NKX1-2Q9UD57 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 AC087164.2-201ENST00000624514 3130 ntBASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 AL590440.2-201ENST00000641973 1595 ntBASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 AC026120.1-201ENST00000611536 926 ntBASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 AC003101.2-201ENST00000612557 442 ntBASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 CR392039.2-201ENST00000623182 509 ntBASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 TNKS-213ENST00000522110 2900 ntBASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 AL138725.1-201ENST00000407347 1314 ntBASIC13.64□□□□□ -0.23
NKX1-2Q9UD57 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 ZNF493-208ENST00000599461 1769 ntBASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 AL138799.1-201ENST00000448213 1675 ntBASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 UBTFL8-201ENST00000426903 2112 ntBASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 AC025183.3-201ENST00000623526 1482 ntBASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 GUCY2EP-203ENST00000531117 1918 ntBASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.63□□□□□ -0.23
NKX1-2Q9UD57 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms